RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZNF420Q8TAQ5 688 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 RPS4Y2Q8TD47 263 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 GATAD2BQ8WXI9 593 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 AQP3Q92482 292 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 UFD1Q92890 307 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 MSI2Q96DH6 328 aaKnown RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 OPALINQ96PE5 141 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 MRI1Q9BV20 369 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 SSBP3Q9BWW4 388 aaPredicted RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 BEX2Q9BXY8 128 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 CCDC90BQ9GZT6 254 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 SLITRK2Q9H156 845 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 ISG20L2Q9H9L3 353 aaKnown RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 TMEM138Q9NPI0 162 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 YAE1D1Q9NRH1 226 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 TREM2Q9NZC2 230 aa8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 TEP1Q99973 2627 aaKnown RBP8.62□□□□□ -1.03
TRAFD1-208ENST00000552890 hCG_1809904A0A1W2PP81 198 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 A0A1W2PPE2 198 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 FAM230AA0A1W2PPH8 454 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 A0A1W2PR64 198 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 A0A1W2PRV1 198 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 FUOMA2VDF0 154 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 C5orf63A6NC05 138 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 CEACAM18A8MTB9 384 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF879B4DU55 563 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 F5H0A9 414 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 ENSAO43768 121 aaKnown RBP8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 NXPH2O95156 264 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 HCKP08631 526 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 WNT2P09544 360 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 CELP19835 753 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 C21orf33P30042 268 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 THBS2P35442 1172 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 PRSS12P56730 875 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 NANOS3P60323 173 aaKnown RBP8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 IL13RA1P78552 427 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 MED22Q15528 200 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 TBCEQ15813 527 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 SPIN3Q5JUX0 258 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 DCAF12L2Q5VW00 463 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 CMTM4Q8IZR5 234 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 GCSAMQ8N6F7 178 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 NKAIN3Q8N8D7 197 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 POC1AQ8NBT0 407 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 OR5D13Q8NGL4 314 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 HPSE2Q8WWQ2 592 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 GHSRQ92847 366 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 TMEM106AQ96A25 262 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 FOXRED1Q96CU9 486 aaPredicted RBP8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 POM121Q96HA1 1249 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 CEP19Q96LK0 163 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 PDCD1LG2Q9BQ51 273 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 TMEM246Q9BRR3 403 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 GPR173Q9NS66 373 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 HIF1ANQ9NWT6 349 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 NLKQ9UBE8 527 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 FOXJ3Q9UPW0 622 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 LRRC42Q9Y546 428 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 CACNG2Q9Y698 323 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 NAV3Q8IVL0 2385 aa8.61□□□□□ -1.03
TRAFD1-208ENST00000552890 OR2AT4A6NND4 320 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 C3orf80F5H4A9 247 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 ADAM20O43506 726 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 GPX5O75715 221 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 ARL6IP5O75915 188 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 KNG1P01042 644 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 PGA5P0DJD9 388 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 AZGP1P25311 298 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 PMELP40967 661 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 CAPZA1P52907 286 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 CAV3P56539 151 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 MLLT11Q13015 90 aaPredicted RBP8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 DOC2BQ14184 412 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 OR2G6Q5TZ20 316 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF367Q7RTV3 350 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 RDH10Q8IZV5 341 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF561Q8N587 486 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 BOLLQ8N9W6 283 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 RPL3LQ92901 407 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 GPER1Q99527 375 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 FAM234AQ9H0X4 552 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 NARFLQ9H6Q4 476 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 ACOT13Q9NPJ3 140 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 GHRLQ9UBU3 117 aa8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 NSD1Q96L73 2696 aaPredicted RBP8.6□□□□□ -1.03
TRAFD1-208ENST00000552890 LOC105371242A0A075B767 164 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 TRBV23-1A0A0A0MS06 115 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 TNFAIP8O95379 198 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 FSTP19883 344 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 GALP22466 123 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 BDKRB2P30411 391 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 SRP14P37108 136 aaKnown RBP8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 PDZK1IP1Q13113 114 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 BLMHQ13867 455 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 UBE2V2Q15819 145 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 FAM189A2Q15884 450 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms