RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 SLC25A19Q9HC21 320 aa7.21□□□□□ -1.25
TMEM116-217ENST00000552801 MRPL15Q9P015 296 aaKnown RBP7.21□□□□□ -1.25
TMEM116-217ENST00000552801 IGLV1-36A0A0B4J1U3 117 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CENPVL3A0A0U1RRI6 287 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 A0A1B0GVI7 797 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 NKX6-3A6NJ46 265 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ANXA2P2A6NMY6 339 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 DVL1O14640 695 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ARPC3O15145 178 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 XRCC2O43543 280 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 GPR137BO60478 399 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ANXA2P07355 339 aaKnown RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 POU1F1P28069 291 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 PSMB10P40306 273 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 PRKXP51817 358 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SRSF4Q08170 494 aaKnown RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 LRRC10Q5BKY1 277 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CLEC12AQ5QGZ9 265 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SLC25A30Q5SVS4 291 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SLC35F1Q5T1Q4 408 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CD300LDQ6UXZ3 194 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 COLCA1Q6ZS62 124 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 DPY19L4Q7Z388 723 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CCDC190Q86UF4 302 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 NAA40Q86UY6 237 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 AQP11Q8NBQ7 271 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 OR9Q2Q8NGE9 314 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 OR2AE1Q8NHA4 323 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 GNPDA2Q8TDQ7 276 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 H1FXQ92522 213 aaKnown RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CITED1Q99966 193 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 FN3KQ9H479 309 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 PRDM13Q9H4Q3 707 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF556Q9HAH1 456 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 IMPAD1Q9NX62 359 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 DNAJB11Q9UBS4 358 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CYB5R1Q9UHQ9 305 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 PEX16Q9Y5Y5 336 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 IGHV3OR15-7A0A075B7D8 119 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 A0A0U1RQK1 487 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SLC22A31A6NKX4 558 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 LOC110117498-PIK3R3F6TDL0 507 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 DCTN6O00399 190 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CCRL2O00421 344 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 IFNGP01579 166 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 IGHV4-59P01825 116 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 APOC1P02654 83 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CSF1P09603 554 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 OSMP13725 252 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CFL1P23528 166 aaKnown RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 PYCR1P32322 319 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 DDOSTP39656 456 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CRISP1P54107 249 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 LSM3P62310 102 aaKnown RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF92Q03936 586 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ST3GAL4Q11206 333 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SEC23BQ15437 767 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SSX1Q16384 188 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 GFOD2Q3B7J2 385 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CDONQ4KMG0 1287 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 GLYATL3Q5SZD4 288 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 STEAP3Q658P3 488 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF841Q6ZN19 808 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 DCXRQ7Z4W1 244 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 VMO1Q7Z5L0 202 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 OR56B2PQ8NGI1 322 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 OR6K6Q8NGW6 343 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 FAM110DQ8TAY7 271 aaPredicted RBP7.2□□□□□ -1.26
TMEM116-217ENST00000552801 SETD6Q8TBK2 473 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 NPRL2Q8WTW4 380 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 LRRC29Q8WV35 223 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 OPALINQ96PE5 141 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 TBX15Q96SF7 602 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 CTSZQ9UBR2 303 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 KPTNQ9Y664 436 aa7.2□□□□□ -1.26
TMEM116-217ENST00000552801 PNMA8CA0A1B0GUJ8 204 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 A0A1W2PQ09 198 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 OR6C68A6NDL8 312 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 TVP23AA6NH52 213 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF878C9JN71 531 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 MUC1P15941 1255 aaPredicted RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 TGFBR1P36897 503 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 IER3P46695 156 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 EIF2B2P49770 351 aaKnown RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 BLVRAP53004 296 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 GMFBP60983 142 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 GRB2P62993 217 aaKnown RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 TSPAN31Q12999 210 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 IKZF1Q13422 519 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 PTGES3Q15185 160 aaKnown RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 SNAI3Q3KNW1 292 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 NKAPLQ5M9Q1 402 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 PGBD2Q6P3X8 592 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 ZNF826PQ6ZT77 177 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 Q6ZTK2 550 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.19□□□□□ -1.26
TMEM116-217ENST00000552801 STX19Q8N4C7 294 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 LINC00471Q8N535 108 aa7.19□□□□□ -1.26
TMEM116-217ENST00000552801 CYB561A3Q8NBI2 242 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms