RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SNF8Q96H20 258 aa2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 NARS2Q96I59 477 aaKnown RBP2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 ZNRD1Q9P1U0 126 aa2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 FBXL3Q9UKT7 428 aa2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 BRCA1P38398 1863 aaKnown RBP2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 ADAMTS9Q9P2N4 1935 aa2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 MTCL1Q9Y4B5 1905 aaKnown RBP2.6□□□□□ -1.99
LSM6P2-201ENST00000552208 TET2Q6N021 2002 aaPredicted RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 C1orf232A0A0U1RR37 186 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 A0A1B0GXF2 115 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 FABP12A6NFH5 140 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 OR5H1A6NKK0 313 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 KLRC4-KLRK1H3BQV0 150 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 TMX2-CTNND1H3BSU7 103 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 TOX3O15405 576 aaPredicted RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 NIPSNAP2O75323 286 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 PSMB5P28074 263 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 CD40LGP29965 261 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 ANP32AP39687 249 aaKnown RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 TUFMP49411 452 aaKnown RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 TAS2R31P59538 309 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 RAB31Q13636 194 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 SHHQ15465 462 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 TRIP13Q15645 432 aaPredicted RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 SNRNP35Q16560 246 aaKnown RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 CEACAM21Q3KPI0 293 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 SLC25A35Q3KQZ1 300 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 LINC00303Q3SY05 128 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 FAM78AQ5JUQ0 283 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 IDNKQ5T6J7 187 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 RIMKLAQ8IXN7 391 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 NECAP1Q8NC96 275 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 OR2M7Q8NG81 312 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 DDI1Q8WTU0 396 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 ZMYND19Q96E35 227 aaPredicted RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 MRPL48Q96GC5 212 aaKnown RBP2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 ZIM3Q96PE6 472 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 METTL26Q96S19 204 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 ZNF649Q9BS31 505 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 C1orf109Q9NX04 203 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 PRO0628Q9UI54 55 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 ZNF222Q9UK12 451 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 TBX21Q9UL17 535 aa2.59□□□□□ -1.99
LSM6P2-201ENST00000552208 NUP153P49790 1475 aaKnown RBP2.58□□□□□ -2
LSM6P2-201ENST00000552208 ADAMTSL3P82987 1691 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 IGHV7-4-1A0A0J9YVY3 117 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 A0A1W2PP18 115 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 TMEM223A0PJW6 202 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 OR2AT4A6NND4 320 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 J3QLI3 93 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 HLA-DQA1P01909 254 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 ZNF3P17036 446 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 RPA3P35244 121 aaPredicted RBP2.58□□□□□ -2
LSM6P2-201ENST00000552208 GCLMP48507 274 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 MNAT1P51948 309 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 LAMTOR4Q0VGL1 99 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 MAPRE2Q15555 327 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 UBE2SQ16763 222 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 C2orf83Q53S99 150 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 Q5W150 140 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 SAXO2Q658L1 398 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 GUSBP11Q6P575 273 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 Q6ZSR6 202 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 BBS7Q8IWZ6 715 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 CIRBP-AS1Q8TBR5 109 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 ACTL9Q8TC94 416 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 TMEM159Q96B96 161 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 NEURL3Q96EH8 262 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 BIRC8Q96P09 236 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 RSG1Q9BU20 258 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 LHX5Q9H2C1 402 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 ASCL3Q9NQ33 180 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 ZNF355PQ9NSJ1 428 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 RBM22Q9NW64 420 aaKnown RBP eCLIP2.58□□□□□ -2
LSM6P2-201ENST00000552208 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 PSMD13Q9UNM6 376 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 FARSAQ9Y285 508 aaKnown RBP2.58□□□□□ -2
LSM6P2-201ENST00000552208 PTPRTO14522 1441 aa2.58□□□□□ -2
LSM6P2-201ENST00000552208 NPHP4O75161 1426 aaPredicted RBP2.58□□□□□ -2
LSM6P2-201ENST00000552208 AHDC1Q5TGY3 1603 aaPredicted RBP2.57□□□□□ -2
LSM6P2-201ENST00000552208 ISPDA4D126 451 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 PRAMEF26H0Y7S4 382 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 TCAPO15273 167 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 CHST10O43529 356 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 EIF1BO60739 113 aaKnown RBP2.57□□□□□ -2
LSM6P2-201ENST00000552208 SPAG7O75391 227 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 MYO1DO94832 1006 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 MPZL1O95297 269 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 IGLV3-25P01717 112 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 ZNF688P0C7X2 276 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 OCMP0CE72 109 aaPredicted RBP2.57□□□□□ -2
LSM6P2-201ENST00000552208 LIMS3P0CW19 117 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 LIMS4P0CW20 117 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 TAC1P20366 129 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 TSPOP30536 169 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 PRSS3P35030 304 aa2.57□□□□□ -2
LSM6P2-201ENST00000552208 DRD3P35462 400 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms