RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 LPCAT3Q6P1A2 487 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 IGFL2Q6UWQ7 119 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 TMEM17Q86X19 198 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 OR5M8Q8NGP6 311 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 MITD1Q8WV92 249 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 APOBEC3DQ96AK3 386 aaPredicted RBP12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 POM121L2Q96KW2 1035 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 HSF4Q9ULV5 492 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 GPR132Q9UNW8 380 aa12.12□□□□□ -0.47
RAB3IP-216ENST00000552199 ZNF850A8MQ14 1090 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 PRR33A8MZF0 331 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 M0R233 179 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 ZNHIT1O43257 154 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 AKR1C4P17516 323 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 HLA-GP17693 338 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 MPGP29372 298 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 NPY4RP50391 375 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 TAS2R31P59538 309 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 GMFBP60983 142 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 PLP2Q04941 152 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 MALLQ13021 153 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 TAF9Q16594 264 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 FBXW9Q5XUX1 488 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 LHFPL1Q86WI0 220 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 OR5AP2Q8NGF4 316 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 OR13G1Q8NGZ3 307 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 EMG1Q92979 244 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 MRPS24Q96EL2 167 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 EP300Q09472 2414 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 ANKRD34BA5PLL1 514 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 SS18L1O75177 396 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 IL18BPO95998 194 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 IFNA7P01567 189 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 IGHG3P01860 377 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 IKZF1Q13422 519 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 LIN54Q6MZP7 749 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 DPPA2Q7Z7J5 298 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 TMEM185AQ8NFB2 350 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 OR56B2PQ8NGI1 322 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 OR1K1Q8NGR3 316 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 BCL2L2Q92843 193 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 SCGB3A2Q96PL1 93 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 PHB2Q99623 299 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 FAAP24Q9BTP7 215 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 PPA2Q9H2U2 334 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 OSGIN2Q9Y236 505 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 STARD10Q9Y365 291 aa12.11□□□□□ -0.47
RAB3IP-216ENST00000552199 FXYD6-FXYD2A0A087WZ82 144 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 ARPC5O15511 151 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 DUS4LO95620 317 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 CD8AP01732 235 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 PPP3CBP16298 524 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 VAMP1P23763 118 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 CHATP28329 748 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 SORDQ00796 357 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 PEG10Q86TG7 708 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 OR51F2Q8NH61 342 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 FXYD6Q9H0Q3 95 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 C5orf66Q9H5L9 145 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 PCDHB16Q9NRJ7 776 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 EHFQ9NZC4 300 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 ZNF581Q9P0T4 197 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 GPR160Q9UJ42 338 aa12.1□□□□□ -0.47
RAB3IP-216ENST00000552199 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 RFPL4AA6NLU0 287 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 RFPL4AL1F8VTS6 287 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 CFDP00746 253 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 SFTPBP07988 381 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 FPR2P25090 351 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 HIKESHIQ53FT3 197 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 TMEM128Q5BJH2 165 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 TMUB2Q71RG4 321 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 P4HA3Q7Z4N8 544 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 PRSS33Q8NF86 280 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 CASTOR1Q8WTX7 329 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 HDHD3Q9BSH5 251 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 AK3Q9UIJ7 227 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 EDARQ9UNE0 448 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 PQLC2LA1A4F0 135 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 CCSO14618 274 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 MSTNO14793 375 aa12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 RRP8O43159 456 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-216ENST00000552199 NOS1APO75052 506 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms