RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ACTA2P62736 377 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 ACTG2P63267 376 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 ACTC1P68032 377 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 ACTA1P68133 377 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 MAPRE2Q15555 327 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 KRT74Q7RTS7 529 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF695Q8IW36 515 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 OR51L1Q8NGJ5 315 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 OR5M8Q8NGP6 311 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 CHPT1Q8WUD6 406 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 LYZL4Q96KX0 146 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 CITED4Q96RK1 184 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 TBC1D23Q9NUY8 699 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF319Q9P2F9 582 aa12.13□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF256Q9Y2P7 627 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-220ENST00000551716 LYSTQ99698 3801 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 CCL24O00175 119 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 PSKH1P11801 424 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 ACKR3P25106 362 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 RAB25P57735 213 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 RPL13AP3Q6NVV1 102 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 HAGHLQ6PII5 290 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-220ENST00000551716 ARPINQ7Z6K5 226 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF329Q86UD4 541 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF511Q8NB15 262 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 POC1AQ8NBT0 407 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 KLHL30-AS1Q8NEE0 82 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 OR52J3Q8NH60 311 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 RNF133Q8WVZ7 376 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 ZNRF4Q8WWF5 429 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF714Q96N38 554 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 FGF23Q9GZV9 251 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-220ENST00000551716 BRD7Q9NPI1 651 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 PAPOLBQ9NRJ5 636 aaKnown RBP12.12□□□□□ -0.47
CACNB3-220ENST00000551716 DNAJC27Q9NZQ0 273 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
CACNB3-220ENST00000551716 IGHV2-26A0A0B4J1V2 119 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 K7N7A8 449 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-220ENST00000551716 AMY1AP04745 511 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 AMY2AP04746 511 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 MAP2K3P46734 347 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 OR3A4PP47883 348 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 SLC35B1P78383 322 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 MEF2CQ06413 473 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-220ENST00000551716 LYPD4Q6UWN0 246 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 OR52L1Q8NGH7 329 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 BCAS4Q8TDM0 211 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 DYDC1Q8WWB3 177 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 DHRS1Q96LJ7 313 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 NRIP2Q9BQI9 281 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 FUZQ9BT04 418 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 CLEC7AQ9BXN2 247 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 TMBIM4Q9HC24 238 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 LYVE1Q9Y5Y7 322 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 SESN1Q9Y6P5 492 aa12.11□□□□□ -0.47
CACNB3-220ENST00000551716 HUWE1Q7Z6Z7 4374 aaKnown RBP12.1□□□□□ -0.47
CACNB3-220ENST00000551716 hADV38S2A0JD32 116 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 H2BFMP0C1H6 154 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 OPRL1P41146 370 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 LUMP51884 338 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-220ENST00000551716 LIPEQ05469 1076 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 LCN1P1Q5VSP4 162 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 GDPD3Q7L5L3 318 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF676Q8N7Q3 588 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 RP9Q8TA86 221 aaKnown RBP12.1□□□□□ -0.47
CACNB3-220ENST00000551716 FAM81AQ8TBF8 368 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 FAM162AQ96A26 154 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 CREB3L1Q96BA8 519 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 CDRT15Q96T59 188 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 ABHD6Q9BV23 337 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 TMEM133Q9H2Q1 129 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 NIPAL2Q9H841 368 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 POLDIP2Q9Y2S7 368 aa12.1□□□□□ -0.47
CACNB3-220ENST00000551716 SIRT4Q9Y6E7 314 aaPredicted RBP12.1□□□□□ -0.47
CACNB3-220ENST00000551716 LEUTXA8MZ59 168 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 SEC14L6B5MCN3 397 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 NXPH2O95156 264 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 CD24P25063 80 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 EDDM3BP56851 147 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 SNAPC1Q16533 368 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 SHFQ7M4L6 423 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 ZNF573Q86YE8 665 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 GNPDA2Q8TDQ7 276 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 RAX2Q96IS3 184 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 CMTM6Q9NX76 183 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 OR14J1Q9UGF5 321 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 SCOCQ9UIL1 159 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 RAB21Q9UL25 225 aa12.09□□□□□ -0.47
CACNB3-220ENST00000551716 A0A0G2JND7 137 aa12.08□□□□□ -0.48
CACNB3-220ENST00000551716 JTBO76095 146 aa12.08□□□□□ -0.48
CACNB3-220ENST00000551716 GADD45GO95257 159 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms