RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 FAM220BPB1ANY3 271 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 M0QZK8 103 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 FXYD1O00168 92 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 IDH3BO43837 385 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 ANXA2P07355 339 aaKnown RBP9.42□□□□□ -0.9
PTCH1-222ENST00000551425 SNRNP70P08621 437 aaKnown RBP9.42□□□□□ -0.9
PTCH1-222ENST00000551425 CD24P25063 80 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 SLC6A6P31641 620 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 PRDX2P32119 198 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 SLC15A1P46059 708 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 OR3A4PP47883 348 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 GPM6AP51674 278 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 MNAT1P51948 309 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 RAB25P57735 213 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 GRB2P62993 217 aaKnown RBP9.42□□□□□ -0.9
PTCH1-222ENST00000551425 FGD3Q5JSP0 725 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 ACP7Q6ZNF0 438 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 EGFL6Q8IUX8 553 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 NDNFQ8TB73 568 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 RGCCQ9H4X1 137 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF319Q9P2F9 582 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 CD300AQ9UGN4 299 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 LYVE1Q9Y5Y7 322 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 COMMD3-BMI1R4GMX3 469 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 SEC14L6B5MCN3 397 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 APOC1P02654 83 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 TK1P04183 234 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 PIPP12273 146 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-222ENST00000551425 CALB2P22676 271 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ACKR3P25106 362 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 BRS3P32247 399 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 PYCR1P32322 319 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 VEGFCP49767 419 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ACTA2P62736 377 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ACTG2P63267 376 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ACTC1P68032 377 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ACTA1P68133 377 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 EIF2B1Q14232 305 aaKnown RBP9.41□□□□□ -0.9
PTCH1-222ENST00000551425 SMIM21Q3B7S5 101 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 IFI44LQ53G44 452 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 LYPD4Q6UWN0 246 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 HACD2Q6Y1H2 254 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 FAM57BQ71RH2 274 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 CYP4Z1Q86W10 505 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 TIGD4Q8IY51 512 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ZDHHC23Q8IYP9 409 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 COMMD1Q8N668 190 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 PROKR2Q8NFJ6 384 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 FANK1Q8TC84 345 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 CHPT1Q8WUD6 406 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 AQP3Q92482 292 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 PIGCQ92535 297 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 STMN2Q93045 179 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 RCN3Q96D15 328 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 HOPXQ9BPY8 73 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-222ENST00000551425 OR10A2Q9H208 303 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 OR52D1Q9H346 318 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 KRCC1Q9NPI7 259 aaPredicted RBP9.41□□□□□ -0.9
PTCH1-222ENST00000551425 ARL8BQ9NVJ2 186 aa9.41□□□□□ -0.9
PTCH1-222ENST00000551425 IGHV2-26A0A0B4J1V2 119 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 RBMY1BA6NDE4 496 aaKnown RBP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 RBMY1EA6NEQ0 496 aaKnown RBP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 DNAJC8O75937 253 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 H1F0P07305 194 aaKnown RBP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 SPARCP09486 303 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 RBMY1DP0C7P1 496 aaKnown RBP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 HTR1DP28221 377 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 NUDT2P50583 147 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF121P58317 390 aaPredicted RBP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 GNG3P63215 75 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.4□□□□□ -0.9
PTCH1-222ENST00000551425 GFOD2Q3B7J2 385 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 C9orf152Q5JTZ5 239 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 TEX30Q5JUR7 227 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 ZBTB49Q6ZSB9 765 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 KRT74Q7RTS7 529 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 OVCH2Q7RTZ1 564 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 POC1AQ8NBT0 407 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 OR2T12Q8NG77 320 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 OR2T4Q8NH00 348 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 ZNRF4Q8WWF5 429 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 HIST1H2AAQ96QV6 131 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 OR8B4Q96RC9 309 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 IFT27Q9BW83 186 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 NDE1Q9NXR1 346 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 AP3M1Q9Y2T2 418 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 ENPP4Q9Y6X5 453 aa9.4□□□□□ -0.9
PTCH1-222ENST00000551425 DHRS12A0PJE2 317 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF732B4DXR9 585 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 K7N7A8 449 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF593O00488 134 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-222ENST00000551425 LY86O95711 162 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF682O95780 498 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 HSD11B1P28845 292 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 ARPINQ7Z6K5 226 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 OR4Q3Q8NH05 313 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 OR8U1Q8NH10 309 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms