RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 GPM6AP51674 278 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 MRPL21Q7Z2W9 205 aaKnown RBP18.07■□□□□ 0.48
PRDM4-205ENST00000550376 FBXL14Q8N1E6 418 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 GMPPAQ96IJ6 420 aaPredicted RBP18.07■□□□□ 0.48
PRDM4-205ENST00000550376 Q96M66 194 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 EIF3KQ9UBQ5 218 aaKnown RBP18.07■□□□□ 0.48
PRDM4-205ENST00000550376 GHRLQ9UBU3 117 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 SLC7A11Q9UPY5 501 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 SNRPGP15A8MWD9 76 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 SLC25A26Q70HW3 274 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 MARCH1Q8TCQ1 289 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 HS3ST6Q96QI5 342 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 SLX1AQ9BQ83 275 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 KCNN3Q9UGI6 736 aa18.07■□□□□ 0.48
PRDM4-205ENST00000550376 MSTNO14793 375 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 CPT2P23786 658 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 NPY4RP50391 375 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 PDZK1IP1Q13113 114 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 BAMBIQ13145 260 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 CCDC54Q8NEL0 328 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 STEAP2Q8NFT2 490 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 WBP1Q96G27 269 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 SLC25A21Q9BQT8 299 aaPredicted RBP18.06■□□□□ 0.48
PRDM4-205ENST00000550376 PLEKHA6Q9Y2H5 1048 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 UBE2QL1A1L167 161 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 SERPINA5P05154 406 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 AKR1C4P17516 323 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 PRDX4Q13162 271 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 MEF2DQ14814 521 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 TFAP2EQ6VUC0 442 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 C3P1Q6ZMU1 363 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 LHFPL2Q6ZUX7 228 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 RFPL4BQ6ZWI9 263 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 ZADH2Q8N4Q0 377 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 RANBP3Q9H6Z4 567 aaPredicted RBP18.06■□□□□ 0.48
PRDM4-205ENST00000550376 SLC23A1Q9UHI7 598 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 NPTNQ9Y639 398 aa18.06■□□□□ 0.48
PRDM4-205ENST00000550376 F8VVB4 439 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 F8VWA3 439 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 AMY2BP19961 511 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 APLNRP35414 380 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 FUT6P51993 359 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 OR2AK2Q8NG84 335 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ST8SIA4Q92187 359 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 APOBEC3DQ96AK3 386 aaPredicted RBP18.05■□□□□ 0.48
PRDM4-205ENST00000550376 NUDT16L1Q9BRJ7 211 aaKnown RBP18.05■□□□□ 0.48
PRDM4-205ENST00000550376 TM2D1Q9BX74 207 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF175Q9Y473 711 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 INTS1Q8N201 2190 aaKnown RBP18.05■□□□□ 0.48
PRDM4-205ENST00000550376 IGHV3-64DA0A0J9YX35 117 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 RGS13O14921 159 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF780AO75290 641 aaPredicted RBP18.05■□□□□ 0.48
PRDM4-205ENST00000550376 CEACAM4O75871 244 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF35P13682 527 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 OPRM1P35372 400 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ATP1B3P54709 279 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 TSPAN5P62079 268 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 MALLQ13021 153 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 DHRS2Q13268 280 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 LGALSLQ3ZCW2 172 aaPredicted RBP18.05■□□□□ 0.48
PRDM4-205ENST00000550376 FAM214BQ7L5A3 538 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF611Q8N823 705 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 SLC30A7Q8NEW0 376 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 PRRT1Q99946 306 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF391Q9UJN7 358 aa18.05■□□□□ 0.48
PRDM4-205ENST00000550376 CDK2AP1O14519 115 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 AGFG2O95081 481 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 IDH3GP51553 393 aaPredicted RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 ERVS71-1P61550 626 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 C11orf88Q6PI97 169 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 CSNK2A3Q8NEV1 391 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 HPSE2Q8WWQ2 592 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 OCSTAMPQ9BR26 566 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 ZZEF1O43149 2961 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 NOS1APO75052 506 aaPredicted RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 SS18L1O75177 396 aaPredicted RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 KIR2DL2P43627 348 aaPredicted RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 HAAOP46952 286 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 FOXC1Q12948 553 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF169Q14929 603 aaPredicted RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 OR2T2Q6IF00 324 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF107Q9UII5 783 aaPredicted RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 ST3GAL6Q9Y274 331 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 SMG1Q96Q15 3661 aaKnown RBP18.04■□□□□ 0.48
PRDM4-205ENST00000550376 SPTBN4Q9H254 2564 aa18.04■□□□□ 0.48
PRDM4-205ENST00000550376 CCSO14618 274 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 HLA-AP01891 365 aaKnown RBP18.03■□□□□ 0.48
PRDM4-205ENST00000550376 PPP1R1AQ13522 171 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 SPICQ8N5J4 248 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 CASTOR1Q8WTX7 329 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 SLAMF9Q96A28 289 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 ZNF75AQ96N20 296 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 SULT4A1Q9BR01 284 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 PRR13Q9NZ81 148 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 IL36RNQ9UBH0 155 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 ARID1AO14497 2285 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 FIGNL2A6NMB9 653 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 SLC22A5O76082 557 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 PNLIPRP3Q17RR3 467 aa18.03■□□□□ 0.48
PRDM4-205ENST00000550376 FTMTQ8N4E7 242 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms