RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 DEFB112Q30KQ8 113 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 CD276Q5ZPR3 534 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 ACP7Q6ZNF0 438 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 SLC36A1Q7Z2H8 476 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 C10orf67Q8IYJ2 551 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 TEX29Q8N6K0 151 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 ACBD7Q8N6N7 88 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 Q8N7P7 452 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 POC1AQ8NBT0 407 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 LY6G5BQ8NDX9 201 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 CNIH3Q8TBE1 160 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 H1FXQ92522 213 aaKnown RBP8.06□□□□□ -1.12
HDAC7-229ENST00000549883 STMN2Q93045 179 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 TMIGD2Q96BF3 282 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 C12orf43Q96C57 262 aaKnown RBP8.06□□□□□ -1.12
HDAC7-229ENST00000549883 DCTN5Q9BTE1 182 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 ALG8Q9BVK2 526 aa8.06□□□□□ -1.12
HDAC7-229ENST00000549883 MS4A7Q9GZW8 240 aaPredicted RBP8.06□□□□□ -1.12
HDAC7-229ENST00000549883 SMPD3Q9NY59 655 aaPredicted RBP8.06□□□□□ -1.12
HDAC7-229ENST00000549883 RFPL4AA6NLU0 287 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 OR4C45A6NMZ5 311 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 RFPL4AL1F8VTS6 287 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 J3QT63 122 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 SIGLEC5O15389 551 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 IGHA1P01876 353 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 PGA5P0DJD9 388 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 CALCBP10092 127 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 GTF2A1P52655 376 aaPredicted RBP8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ERVFRD-1P60508 538 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ACTC1P68032 377 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ACTA1P68133 377 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 IL13RA1P78552 427 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 BAMBIQ13145 260 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 KLRD1Q13241 179 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 GALEQ14376 348 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 SLC9A3R2Q15599 337 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ZSCAN26Q16670 478 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 XAF1Q6GPH4 301 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 C9orf139Q6ZV77 190 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 FAM220AQ7Z4H9 259 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 VMO1Q7Z5L0 202 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 PNKDQ8N490 385 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ZNF671Q8TAW3 534 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 FAM216AQ8WUB2 273 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 LHX4Q969G2 390 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 FGGYQ96C11 551 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 NRIP2Q9BQI9 281 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 CHST5Q9GZS9 411 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 CNTD2Q9H8S5 307 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 SIRT7Q9NRC8 400 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 TNFRSF19Q9NS68 423 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ERVK13-1Q9NX77 482 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 MTCH1Q9NZJ7 389 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 ONECUT1Q9UBC0 465 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 IL36RNQ9UBH0 155 aa8.05□□□□□ -1.12
HDAC7-229ENST00000549883 SLC25A10Q9UBX3 287 aaPredicted RBP8.05□□□□□ -1.12
HDAC7-229ENST00000549883 A0A1W2PRD5 423 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 A0A1W2PRF3 423 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 A0A1W2PRM7 423 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 MEX3AA1L020 520 aaKnown RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 NKX6-3A6NJ46 265 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 DHRS7CA6NNS2 312 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 TRIM77I1YAP6 450 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 NOS1APO75052 506 aaPredicted RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 HTR1AP08908 422 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 GNAO1P09471 354 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 LIMS3P0CW19 117 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 LIMS4P0CW20 117 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 NDUFB7P17568 137 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 MPZP25189 248 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ETV1P50549 477 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ERVK11-1P61568 191 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ACTG1P63261 375 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ADARB1P78563 741 aaKnown RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 SCGB2A2Q13296 93 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 DOC2BQ14184 412 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 LRRC10Q5BKY1 277 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ZNF691Q5VV52 312 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 METTL11BQ5VVY1 283 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 LAIR2Q6ISS4 152 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 CRIP3Q6Q6R5 217 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ZNF573Q86YE8 665 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 PIP4P2Q8N4L2 257 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 PNLDC1Q8NA58 520 aaKnown RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 TMEM185AQ8NFB2 350 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 C8orf46Q8TAG6 207 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 CYGBQ8WWM9 190 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 RGP1Q92546 391 aaPredicted RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 SLAMF9Q96A28 289 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 RFT1Q96AA3 541 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 SPACA5Q96QH8 159 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 PDCD1LG2Q9BQ51 273 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 ADI1Q9BV57 179 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 PLEKHA1Q9HB21 404 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 HES4Q9HCC6 221 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 C19orf12Q9NSK7 152 aa8.04□□□□□ -1.12
HDAC7-229ENST00000549883 MRPS18AQ9NVS2 196 aaKnown RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 NKX1-2Q9UD57 310 aaPredicted RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 OR14J1Q9UGF5 321 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms