RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KRBOX4Q5JUW0 171 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 TIPARPQ7Z3E1 657 aaKnown RBP9.73□□□□□ -0.85
LINC00661-204ENST00000549354 PPP1R32Q7Z5V6 425 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 WDSUB1Q8N9V3 476 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 AQP3Q92482 292 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 CDC6Q99741 560 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 ANGPTL4Q9BY76 406 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 SCPEP1Q9HB40 452 aa9.73□□□□□ -0.85
LINC00661-204ENST00000549354 TRAPPC6AO75865 159 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 CD74P04233 296 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 FKBP2P26885 142 aaKnown RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ZNF239Q16600 458 aaKnown RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ZNF813Q6ZN06 617 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ADPRHL1Q8NDY3 354 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 DDIT4LQ96D03 193 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 EDEM2Q9BV94 578 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 RPS10P5Q9NQ39 176 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 GPR173Q9NS66 373 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 PLEK2Q9NYT0 353 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 A0A0A6YYD4 124 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 MEGF11A6BM72 1044 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 NME2P1O60361 137 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 SFTA3P0C7M3 94 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 CRABP1P29762 137 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 LPAR6P43657 344 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 SSPNQ14714 243 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 PGAP1Q75T13 922 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 H1FNTQ75WM6 255 aaPredicted RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ST7LQ8TDW4 575 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 TMEM59Q9BXS4 323 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 SERINC1Q9NRX5 453 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 A0A1W2PNU3 283 aaPredicted RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 LIPT2A6NK58 231 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 M0R036 132 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 TERTO14746 1132 aaKnown RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 DUS4LO95620 317 aaKnown RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 SLC25A4P12235 298 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ROM1Q03395 351 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ZNF345Q14585 488 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 PEA15Q15121 130 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 TMEM244Q5VVB8 128 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 TERB2Q8NHR7 220 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 CLCC1Q96S66 551 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 BCL2L14Q9BZR8 327 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 PROK2Q9HC23 129 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 NDRG3Q9UGV2 375 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 ATPIF1Q9UII2 106 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 HEATR1Q9H583 2144 aaKnown RBP9.72□□□□□ -0.85
LINC00661-204ENST00000549354 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
LINC00661-204ENST00000549354 A0A087WZY1 265 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 NSG1A0A0A6YYJ2 146 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 C9orf172C9J069 976 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 PRH1P02810 166 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 CPT2P23786 658 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 PTGFRP43088 359 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 EIF3IQ13347 325 aaKnown RBP9.71□□□□□ -0.85
LINC00661-204ENST00000549354 FAM76BQ5HYJ3 339 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 DTX1Q86Y01 620 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 UEVLDQ8IX04 471 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 PRR18Q8N4B5 295 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 SLC22A24Q8N4F4 322 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 OR5D14Q8NGL3 314 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 CT55Q8WUE5 264 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 SLCO5A1Q9H2Y9 848 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 SLC17A5Q9NRA2 495 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 AMDHD2Q9Y303 409 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 GTF3C1Q12789 2109 aa9.71□□□□□ -0.85
LINC00661-204ENST00000549354 A0A1W2PNV4 684 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 A0A1W2PR80 420 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 ZNF850A8MQ14 1090 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 LDLRAD4O15165 306 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 TXNL1O43396 289 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SGCEO43556 437 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SNAPC5O75971 98 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 F2RL1P55085 397 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 OR2B8PP59922 312 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 LPCAT3Q6P1A2 487 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 P4HA3Q7Z4N8 544 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 OR8B12Q8NGG6 310 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 OR5H2Q8NGV7 314 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 TMEM230Q96A57 120 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 CYTL1Q9NRR1 136 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 ALKBH4Q9NXW9 302 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SPTBN1Q01082 2364 aaKnown RBP9.71□□□□□ -0.86
LINC00661-204ENST00000549354 IGKV1D-8A0A087WSZ0 117 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 PMS2P1A4D2B8 440 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 HSPB2A8KAH6 182 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SNAPINO95295 136 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 S100A6P06703 90 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 EIF1P41567 113 aaKnown RBP9.71□□□□□ -0.86
LINC00661-204ENST00000549354 CX3CR1P49238 355 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SSR4P51571 173 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 SCAND1P57086 179 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 RPS18P62269 152 aaKnown RBP9.71□□□□□ -0.86
LINC00661-204ENST00000549354 RIPPLY1Q0D2K3 151 aa9.71□□□□□ -0.86
LINC00661-204ENST00000549354 HSPB2Q16082 182 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms