RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 Q8IYB0 196 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 SCCPDHQ8NBX0 429 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 OR51D1Q8NGF3 324 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 OR5D18Q8NGL1 313 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 AQP3Q92482 292 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 SLC25A28Q96A46 364 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 PTX4Q96A99 478 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 PLEKHF2Q9H8W4 249 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 SAP30LQ9HAJ7 183 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 ELL3Q9HB65 397 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 SMURF1Q9HCE7 757 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 IL36GQ9NZH8 169 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 FBLN5Q9UBX5 448 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 ADAM30Q9UKF2 790 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 ING4Q9UNL4 249 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 RAI1Q7Z5J4 1906 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-203ENST00000547063 CLPXO76031 633 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 KDM4BO94953 1096 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 PLATP00750 562 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CD8AP01732 235 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CSTBP04080 98 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 SOD3P08294 240 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CFHR2P36980 270 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CLDN12P56749 244 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CCL8P80075 99 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 P2RY14Q15391 338 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 C2orf76Q3KRA6 126 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CRIP3Q6Q6R5 217 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 LINC00299Q6ZSB3 139 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 WDR86Q86TI4 376 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CDH24Q86UP0 819 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 CALHM1Q8IU99 346 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 OR11L1Q8NGX0 322 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 ITLN1Q8WWA0 313 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 HPS1Q92902 700 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 MRPS24Q96EL2 167 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 VRK1Q99986 396 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 EDARQ9UNE0 448 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 LAMP3Q9UQV4 416 aa13.42□□□□□ -0.26
TRAFD1-203ENST00000547063 USP9YO00507 2555 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 ARFGEF3Q5TH69 2177 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 LRRC30A6NM36 301 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 H7C417 338 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 HAX1O00165 279 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 CDIPTO14735 213 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 RGS5O15539 181 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 SPRY1O43609 319 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 SNRPBP14678 240 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 RAB6AP20340 208 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 PRAMEF6Q5VXH4 476 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 RNF144BQ7Z419 303 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 ZNF295-AS1Q8N0V1 137 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 OR10Z1Q8NGY1 313 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 NEU4Q8WWR8 484 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 POM121Q96HA1 1249 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 CEP19Q96LK0 163 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 CACNG6Q9BXT2 260 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 COMMD3Q9UBI1 195 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 OR5V1Q9UGF6 321 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 RAB22AQ9UL26 194 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 PPP1R3CQ9UQK1 317 aa13.41□□□□□ -0.26
TRAFD1-203ENST00000547063 DOPEY2Q9Y3R5 2298 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 hCG_1807616A0A1W2PRN6 198 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 ANGPTL7O43827 346 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 NOS1APO75052 506 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 SCGNO76038 276 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 PAHP00439 452 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 VSIG8P0DPA2 414 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 GTF2F2P13984 249 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 IRF2P14316 349 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 ART1P52961 327 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 ZNF181Q2M3W8 571 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 SLC22A6Q4U2R8 563 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 UBE2NLQ5JXB2 153 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 ELP2Q6IA86 826 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 FIP1L1Q6UN15 594 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 C1orf87Q8N0U7 546 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 SAMD12Q8N8I0 201 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 Q8TCH9 128 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 RAB40AQ8WXH6 277 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 NKX3-1Q99801 234 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 UFSP2Q9NUQ7 469 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 C1orf123Q9NWV4 160 aa13.4□□□□□ -0.26
TRAFD1-203ENST00000547063 A0A0B4J203 849 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 TMEM272A0A1B0GTI8 110 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 TMEM14DPA8MWL7 114 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 H3BUI4 141 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 SYNGR1O43759 233 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 HTR3BO95264 441 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 APOA1P02647 267 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 PGA5P0DJD9 388 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 SERPINA2P20848 420 aa13.39□□□□□ -0.27
TRAFD1-203ENST00000547063 COL8A1P27658 744 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 362.4 ms