RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 NAT6Q93015 286 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM147Q9BVK8 224 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 MYOZ1Q9NP98 299 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-212ENST00000546744 A0A1B0GTQ1 180 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 TBXA2RP21731 343 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 FOLR3P41439 243 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 CSN1S1P47710 185 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ZG16BQ96DA0 208 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ADGRG7Q96K78 797 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 UTRNP46939 3433 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 SH2D1BO14796 132 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 PDE6DO43924 150 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
PTCH1-212ENST00000546744 OR8B8Q15620 311 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF770Q6IQ21 691 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-212ENST00000546744 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 FA2HQ7L5A8 372 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 OR11G2Q8NGC1 345 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 BAHD1Q8TBE0 780 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-212ENST00000546744 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 C1QTNF6Q9BXI9 259 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 MAGT1Q9H0U3 335 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ST3GAL6Q9Y274 331 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 SHROOM3Q8TF72 1996 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF816-ZNF321PA0A0X1KG74 233 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 A0A1W2PPE2 198 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 EIF3GO75821 320 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTCH1-212ENST00000546744 SERF2P84101 59 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 RPEL1Q2QD12 228 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 LDLRAD3Q86YD5 345 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 Q8IYB0 196 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ERGIC1Q969X5 290 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 STARD5Q9NSY2 213 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 THAP10Q9P2Z0 257 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-212ENST00000546744 KCNE5Q9UJ90 142 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 HS3ST3A1Q9Y663 406 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 ARID1AO14497 2285 aa11.45□□□□□ -0.58
PTCH1-212ENST00000546744 LOC102723971A0A1B0GUV8 181 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 MUC1P15941 1255 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 HOXA6P31267 233 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 GABRA4P48169 554 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 ASCL1P50553 236 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 TAS2R60P59551 318 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 SLC38A11Q08AI6 406 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 PRTGQ2VWP7 1150 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 FBXO46Q6PJ61 603 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 CCDC74BQ96LY2 380 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 WFIKKN1Q96NZ8 548 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 RNF2Q99496 336 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 P2RX4Q99571 388 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 TUBA4BQ9H853 241 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 RCC2Q9P258 522 aaKnown RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 WDR1O75083 606 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 ADAP1O75689 374 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 SRP14P37108 136 aaKnown RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 LURAP1LQ8IV03 231 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM104Q8NE00 496 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF707Q96C28 371 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 DUSP23Q9BVJ7 150 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 UBE2ZQ9H832 354 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 SLC52A3Q9NQ40 469 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 TBX21Q9UL17 535 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 LIPGQ9Y5X9 500 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 OR7C2O60412 319 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 CFIP05156 583 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 ERVS71-1P61550 626 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 GGTLC2Q14390 218 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 PMCHL1Q16048 86 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 VAX1Q5SQQ9 334 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 IL22RA2Q969J5 263 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 AQP10Q96PS8 301 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM204Q9BSN7 226 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 PRDM7Q9NQW5 492 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 ING1Q9UK53 422 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 DSPPQ9NZW4 1301 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 DBX1A6NMT0 343 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 OR4C45A6NMZ5 311 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 CDC34P49427 236 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 INSL4Q14641 139 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 CA13Q8N1Q1 262 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 ATG101Q9BSB4 218 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 LRIT1Q9P2V4 623 aa11.44□□□□□ -0.58
PTCH1-212ENST00000546744 NOSIPQ9Y314 301 aaKnown RBP11.44□□□□□ -0.58
PTCH1-212ENST00000546744 C3orf85A0A1B0GTC6 90 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 FFAR1O14842 300 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 LANCL1O43813 399 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 BMP5P22003 454 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 SLC37A1P57057 533 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 RHOBP62745 196 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 B4GALNT1Q00973 533 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 HLA-DRB5Q30154 266 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 C16orf52Q8NHV5 167 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 CA10Q9NS85 328 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 OCIAD1Q9NX40 245 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 IL17BQ9UHF5 180 aa11.43□□□□□ -0.58
PTCH1-212ENST00000546744 CFDP00746 253 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms