RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 LINC00587B1AMM8 73 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SHISA8B8ZZ34 492 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 H7C1Q1 480 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 MBPP02686 304 aaPredicted RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 GLAP06280 429 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SNRNP70P08621 437 aaKnown RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 MSR1P21757 451 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 ANOS1P23352 680 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 S100PP25815 95 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 CAMLGP49069 296 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 TMEM187Q14656 261 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 C10orf128Q5T292 105 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 RPUSD3Q6P087 351 aaKnown RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 PLXDC2Q6UX71 529 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 GALNTL5Q7Z4T8 443 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 GJC3Q8NFK1 279 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 OR5L2Q8NGL0 311 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 OR5D18Q8NGL1 313 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 ERGIC1Q969X5 290 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SLC35B3Q9H1N7 401 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SPACA1Q9HBV2 294 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 ZNF160Q9HCG1 818 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 NECAP2Q9NVZ3 263 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 PLEKHJ1Q9NW61 149 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 ASXL3Q9C0F0 2248 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 IGKV1D-8A0A087WSZ0 117 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 IGHV1OR15-9A0A0B4J2B8 117 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 IGHV3-20A0A0C4DH32 117 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 A0A1W2PPH5 198 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SHISA7A6NL88 538 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 A6NLC8 198 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 UMAD1C9J7I0 102 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 M0R036 132 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 NME2P1O60361 137 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 EIF1BO60739 113 aaKnown RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 OR5H8P0DN80 308 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 FCGR2AP12318 317 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 OTX1P32242 354 aaPredicted RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 PTGDSP41222 190 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 EIF1P41567 113 aaKnown RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 PIGPP57054 158 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 OR1D5P58170 312 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 HIST1H3AP68431 136 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 ZNF616Q08AN1 781 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 FABP9Q0Z7S8 132 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 UBE2V2Q15819 145 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 AKIRIN2Q53H80 203 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 HIST2H3PS2Q5TEC6 136 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 CARD17Q5XLA6 110 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 RBMS3Q6XE24 437 aaKnown RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 SLC16A13Q7RTY0 426 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 OR8G5Q8NG78 346 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 TCTEX1D2Q8WW35 142 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SPSB1Q96BD6 273 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 CYYR1Q96J86 154 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 SMIM3Q9BZL3 60 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 EIF5A2Q9GZV4 153 aaKnown RBP7.66□□□□□ -1.18
TDP1-204ENST00000545686 NKX2-4Q9H2Z4 354 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 NELFAQ9H3P2 528 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 TRBV11-1A0A0K0K1C0 115 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 E9PLN8 166 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 AP4M1O00189 453 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 SCGB1D2O95969 90 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 HEXBP07686 556 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 DUSP1P28562 367 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 GUCA1AP43080 201 aaPredicted RBP7.65□□□□□ -1.18
TDP1-204ENST00000545686 SULT1A1P50225 295 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 CFHR1Q03591 330 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 DLX2Q07687 328 aaPredicted RBP7.65□□□□□ -1.18
TDP1-204ENST00000545686 RHBDD2Q6NTF9 364 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 LIAT1Q6ZQX7 453 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 SYT13Q7L8C5 426 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 C6orf201Q7Z4U5 140 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 TMEM156Q8N614 296 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 OR2M3Q8NG83 312 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 HPSE2Q8WWQ2 592 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 NTNG2Q96CW9 530 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 LIN37Q96GY3 246 aaPredicted RBP7.65□□□□□ -1.18
TDP1-204ENST00000545686 C18orf12Q96KH6 178 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 ANGPTL4Q9BY76 406 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 METTL7AQ9H8H3 244 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 KCNJ16Q9NPI9 418 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 FGF21Q9NSA1 209 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 USP34Q70CQ2 3546 aa7.65□□□□□ -1.18
TDP1-204ENST00000545686 SPAG17Q6Q759 2223 aa7.65□□□□□ -1.19
TDP1-204ENST00000545686 ARID1AO14497 2285 aa7.65□□□□□ -1.19
TDP1-204ENST00000545686 MASP2O00187 686 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 ZNF728P0DKX0 622 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 TMEM225BP0DP42 221 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 FAHP16930 419 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 EIF2S3P41091 472 aaKnown RBP7.64□□□□□ -1.19
TDP1-204ENST00000545686 AKR1C3P42330 323 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 CLINT1Q14677 625 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 ABCA11PQ4W5N1 156 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 KRBOX4Q5JUW0 171 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 Q6ZS52 159 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 RABEPKQ7Z6M1 372 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 LRRC18Q8N456 261 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 NPRL2Q8WTW4 380 aa7.64□□□□□ -1.19
TDP1-204ENST00000545686 IP6K3Q96PC2 410 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms