RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 IGFL3Q6UXB1 125 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 CCDC36Q8IYA8 594 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 NAXEQ8NCW5 288 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 SLC30A7Q8NEW0 376 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 TERB2Q8NHR7 220 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 WNT2BQ93097 391 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 ZFHX2Q9C0A1 2572 aaPredicted RBP14.35□□□□□ -0.11
CHFR-224ENST00000545046 PLSCR2Q9NRY7 297 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 HSF4Q9ULV5 492 aa14.35□□□□□ -0.11
CHFR-224ENST00000545046 IGKV1-12A0A0C4DH73 117 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 OR2AT4A6NND4 320 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 IGKV1D-12P01611 117 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 UBE2NP61088 152 aaKnown RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 MPPED2Q15777 294 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 C17orf107Q6ZR85 190 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 ASCL5Q7RTU5 278 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 ZDHHC23Q8IYP9 409 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 ZSCAN4Q8NAM6 433 aaPredicted RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 MRGPRFQ96AM1 343 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 WBP1Q96G27 269 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 HIST1H2AAQ96QV6 131 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 URB1O60287 2271 aaKnown RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 IGHV1-2P23083 117 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 TBC1D28Q2M2D7 210 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 C2orf68Q2NKX9 166 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 CEACAM21Q3KPI0 293 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 CNEP1R1Q8N9A8 125 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 EMG1Q92979 244 aaKnown RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 CYYR1Q96J86 154 aa14.34□□□□□ -0.11
CHFR-224ENST00000545046 ZNF701Q9NV72 531 aaPredicted RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 ZNF230Q9UIE0 474 aaPredicted RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 RIF1Q5UIP0 2472 aaKnown RBP14.34□□□□□ -0.11
CHFR-224ENST00000545046 FAM186AA6NE01 2351 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 PQLC2LA1A4F0 135 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 AHRRA9YTQ3 701 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 F5H5P2 479 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 TSC22D2O75157 780 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 SIX6O95475 246 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 HLA-AP01891 365 aaKnown RBP14.33□□□□□ -0.11
CHFR-224ENST00000545046 DHRS2Q13268 280 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 GUSBP1Q15486 140 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 CHRFAM7AQ494W8 412 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 OR2A2Q6IF42 318 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 FAHD2BQ6P2I3 314 aaPredicted RBP14.33□□□□□ -0.11
CHFR-224ENST00000545046 Q6ZT83 130 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 CALHM1Q8IU99 346 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 SLC7A5P1Q8MH63 180 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 ZNF611Q8N823 705 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 MARCH1Q8TCQ1 289 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 FAHD2AQ96GK7 314 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 RADILQ96JH8 1075 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 GPR137Q96N19 417 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 ST3GAL6Q9Y274 331 aa14.33□□□□□ -0.11
CHFR-224ENST00000545046 G3V3Q6 166 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 CNOT4O95628 575 aaKnown RBP14.33□□□□□ -0.12
CHFR-224ENST00000545046 WNT5AP41221 380 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 MRPL49Q13405 166 aaKnown RBP14.33□□□□□ -0.12
CHFR-224ENST00000545046 SIGIRRQ6IA17 410 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 RPUSD3Q6P087 351 aaKnown RBP14.33□□□□□ -0.12
CHFR-224ENST00000545046 SLC25A26Q70HW3 274 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 LYG2Q86SG7 212 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 FBXL14Q8N1E6 418 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 OR5AP2Q8NGF4 316 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 ASB13Q8WXK3 278 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 ZNF75AQ96N20 296 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 SCGB3A2Q96PL1 93 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 TAAR6Q96RI8 345 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 FAAP24Q9BTP7 215 aa14.33□□□□□ -0.12
CHFR-224ENST00000545046 FIGNL2A6NMB9 653 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 ANKRD30BLA7E2S9 258 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 CD300LBA8K4G0 201 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 PROB1E7EW31 1015 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 GEMIN2O14893 280 aaKnown RBP14.32□□□□□ -0.12
CHFR-224ENST00000545046 SNAPC5O75971 98 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 SFTPBP07988 381 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 ZNF35P13682 527 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 ZBTB25P24278 435 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 CD34P28906 385 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 H2BFSP57053 126 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 TAS2R31P59538 309 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 PIGYQ3MUY2 71 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 LGALSLQ3ZCW2 172 aaPredicted RBP14.32□□□□□ -0.12
CHFR-224ENST00000545046 C9orf106Q8NAJ2 232 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 OR6K3Q8NGY3 331 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 SNIP1Q8TAD8 396 aaKnown RBP14.32□□□□□ -0.12
CHFR-224ENST00000545046 MAFIPQ8WZ33 124 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 EHFQ9NZC4 300 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 NOP16Q9Y3C1 178 aaKnown RBP14.32□□□□□ -0.12
CHFR-224ENST00000545046 LYZL6O75951 148 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 RGS11O94810 467 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 AKR1C4P17516 323 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 CHATP28329 748 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 GPM6AP51674 278 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 IL13RA1P78552 427 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 SAXO1Q8IYX7 474 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 OR5A2Q8NGI9 324 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 POM121Q96HA1 1249 aa14.32□□□□□ -0.12
CHFR-224ENST00000545046 CMSS1Q9BQ75 279 aaKnown RBP14.32□□□□□ -0.12
CHFR-224ENST00000545046 COL25A1Q9BXS0 654 aaPredicted RBP14.32□□□□□ -0.12
CHFR-224ENST00000545046 PPA2Q9H2U2 334 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms