RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TRBV23-1A0A0A0MS06 115 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 A0A1W2PPH5 198 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 SLC1A7O00341 560 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 RHBDL1O75783 438 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 NXPH2O95156 264 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 PGA5P0DJD9 388 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 IGHV4-38-2P0DP08 117 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 MMP9P14780 707 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 PRKACBP22694 351 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 PRTN3P24158 256 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 GMFBP60983 142 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 UBA52P62987 128 aaKnown RBP9.77□□□□□ -0.85
HDAC4-216ENST00000544989 HOXA4Q00056 320 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-216ENST00000544989 SRSF2Q01130 221 aaKnown RBP9.77□□□□□ -0.85
HDAC4-216ENST00000544989 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 IL24Q13007 206 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 BAMBIQ13145 260 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 BLMHQ13867 455 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 ODF4Q2M2E3 257 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 ACP7Q6ZNF0 438 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 C1orf122Q6ZSJ8 110 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 UTS2BQ765I0 119 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 Q8IYB0 196 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF561Q8N587 486 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 FAM216BQ8N7L0 139 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 SETD9Q8NE22 299 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 DNAAF1Q8NEP3 725 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 TBC1D15Q8TC07 691 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 NPRL2Q8WTW4 380 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 C22orf15Q8WYQ4 148 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 GCDHQ92947 438 aaPredicted RBP9.77□□□□□ -0.85
HDAC4-216ENST00000544989 SLC25A28Q96A46 364 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 SDSLQ96GA7 329 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 GAFA1Q96PS6 74 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 PCGF1Q9BSM1 259 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 DCTN5Q9BTE1 182 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 RASSF4Q9H2L5 321 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 NOX4Q9NPH5 578 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 SNTG1Q9NSN8 517 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 MRPS18AQ9NVS2 196 aaKnown RBP9.77□□□□□ -0.85
HDAC4-216ENST00000544989 HHLA2Q9UM44 414 aa9.77□□□□□ -0.85
HDAC4-216ENST00000544989 J3QLW9 94 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 M0R1W7 72 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 RGS9O75916 674 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 CYB5AP00167 134 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 IGHA1P01876 353 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 CCDC159P0C7I6 412 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 PSG2P11465 335 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF19P17023 458 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF20P17024 532 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 NDUFB7P17568 137 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 GABRA2P47869 451 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 COMPP49747 757 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 OR12D2P58182 307 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 ARF6P62330 175 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 IL18R1Q13478 541 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 MED21Q13503 144 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 METAP1DQ6UB28 335 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 FIP1L1Q6UN15 594 aaKnown RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 C12orf54Q6X4T0 127 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 PRSS35Q8N3Z0 413 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 ZDHHC22Q8N966 263 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 OR5T2Q8NGG2 359 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 H1FXQ92522 213 aaKnown RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 BORCS8Q96FH0 119 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 C4orf36Q96KX1 117 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 NRIP2Q9BQI9 281 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 ALG8Q9BVK2 526 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 JAM3Q9BX67 310 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 SIRPDQ9H106 197 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 VCXQ9H320 206 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 PRDM13Q9H4Q3 707 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 ONECUT1Q9UBC0 465 aa9.76□□□□□ -0.85
HDAC4-216ENST00000544989 CAB39Q9Y376 341 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-216ENST00000544989 IGKV1D-17A0A075B6S4 117 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 FAM230AA0A1W2PPH8 454 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 TMEM212A6NML5 194 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 KNG1P01042 644 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 OCM2P0CE71 109 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 OCMP0CE72 109 aaPredicted RBP9.75□□□□□ -0.85
HDAC4-216ENST00000544989 DCKP27707 260 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 KIR3DL2P43630 455 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 RBP2P50120 134 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 CAPZA1P52907 286 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 GBX2P52951 348 aaPredicted RBP9.75□□□□□ -0.85
HDAC4-216ENST00000544989 ATP1B3P54709 279 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 ALKBH1Q13686 389 aaKnown RBP9.75□□□□□ -0.85
HDAC4-216ENST00000544989 NCR3LG1Q68D85 454 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 LHFPL2Q6ZUX7 228 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 MKXQ8IYA7 352 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 ZNF676Q8N7Q3 588 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 ZDHHC16Q969W1 377 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 SPSB1Q96BD6 273 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 SEH1LQ96EE3 360 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 PELI1Q96FA3 418 aa9.75□□□□□ -0.85
HDAC4-216ENST00000544989 CPNE2Q96FN4 548 aaPredicted RBP9.75□□□□□ -0.85
HDAC4-216ENST00000544989 TBX15Q96SF7 602 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms