RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CKLFQ9UBR5 152 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 HHLA2Q9UM44 414 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 SF3B6Q9Y3B4 125 aaKnown RBP4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 POMT1Q9Y6A1 747 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 HSPE1-MOB4S4R3N1 261 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 V9GYS6 101 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 WNK1Q9H4A3 2382 aa4.67□□□□□ -1.66
CLSTN3-215ENST00000544584 H0YAE9 185 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 J3QLW9 94 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 SH2D1BO14796 132 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 SIGLEC5O15389 551 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 AKR7A2O43488 359 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 NOS1APO75052 506 aaPredicted RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ENTPD6O75354 484 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 TTRP02766 147 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ISG15P05161 165 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 CHRM2P08172 466 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 FBP1P09467 338 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 DBTP11182 482 aaKnown RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ZNF19P17023 458 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 CCL1P22362 96 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ACKR3P25106 362 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 CD80P33681 288 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 MTCP1P56278 107 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 TAS2R43P59537 309 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 RPL31P62899 125 aaKnown RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ACSM1Q08AH1 577 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ZIK1Q3SY52 487 aaPredicted RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 WDR38Q5JTN6 314 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 SPIN3Q5JUX0 258 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 TMEM42Q69YG0 159 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 FDX2Q6P4F2 183 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 METAP1DQ6UB28 335 aaPredicted RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 GDPGP1Q6ZNW5 385 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 UTS2BQ765I0 119 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 SERPINA12Q8IW75 414 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 DHRSXQ8N5I4 330 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 POC1AQ8NBT0 407 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 TMEM185AQ8NFB2 350 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 OR13C3Q8NGS6 347 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 OR5R1Q8NH85 324 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 OR5AK2Q8NH90 309 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 RHOXF1Q8NHV9 184 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 CYGBQ8WWM9 190 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 AQP3Q92482 292 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 RPL3LQ92901 407 aaKnown RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 DVL3Q92997 716 aaPredicted RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 LYZL4Q96KX0 146 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 CCL13Q99616 98 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 SLC6A7Q99884 636 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 ALG8Q9BVK2 526 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 CHST5Q9GZS9 411 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 DCLRE1BQ9H816 532 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 MMP26Q9NRE1 261 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 FAM118AQ9NWS6 357 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 OPN4Q9UHM6 478 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 MRM2Q9UI43 246 aaKnown RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 RPUSD1Q9UJJ7 312 aaKnown RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 COPS3Q9UNS2 423 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 DHDHQ9UQ10 334 aa4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 EXOSC1Q9Y3B2 195 aaKnown RBP4.66□□□□□ -1.66
CLSTN3-215ENST00000544584 TANC2Q9HCD6 1990 aa4.65□□□□□ -1.66
CLSTN3-215ENST00000544584 TRAV40A0A0B4J280 105 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 LOC107986453A0A1B0GWG9 222 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM230AA0A1W2PPH8 454 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 hADV38S2A0JD32 116 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 PQLC2LA1A4F0 135 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 EFCAB10A6NFE3 127 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 POM121CA8CG34 1229 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 H3BNX3 289 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 INMTO95050 263 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ALX3O95076 343 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 KNG1P01042 644 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 FSHBP01225 129 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 IGLV3-1P01715 115 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 RNASE1P07998 156 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 PGA5P0DJD9 388 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 PSKH1P11801 424 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 MPZP25189 248 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 MAPK3P27361 379 aaPredicted RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 PEX2P28328 305 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 EPHA2P29317 976 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 PRDX2P32119 198 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 COMPP49747 757 aaPredicted RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 UBE2E1P51965 193 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ERVFRD-1P60508 538 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 GMFBP60983 142 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 SEC61A1P61619 476 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ARF6P62330 175 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 PPP3R1P63098 170 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ALKBH1Q13686 389 aaKnown RBP4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ODF4Q2M2E3 257 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 SPRNQ5BIV9 151 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM201AQ5SY85 155 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 STUMQ69YW2 141 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 C16orf87Q6PH81 154 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF841Q6ZN19 808 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ACP7Q6ZNF0 438 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF788Q6ZQV5 615 aa4.65□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF826PQ6ZT77 177 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms