RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 BTG1P62324 171 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 FABP5Q01469 135 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 PDZK1IP1Q13113 114 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 KISS1Q15726 138 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 ASPHD2Q6ICH7 369 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 LRRC28Q86X40 367 aaPredicted RBP10.25□□□□□ -0.77
DDX55-210ENST00000543016 SPICQ8N5J4 248 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 ZNF420Q8TAQ5 688 aaPredicted RBP10.25□□□□□ -0.77
DDX55-210ENST00000543016 TRMT10AQ8TBZ6 339 aaKnown RBP10.25□□□□□ -0.77
DDX55-210ENST00000543016 LRRC29Q8WV35 223 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 Q96MF0 132 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 UQCC2Q9BRT2 126 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 PCDHB16Q9NRJ7 776 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 WIPI2Q9Y4P8 454 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 PPIAL4AQ9Y536 164 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 CACNG2Q9Y698 323 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 PDZD2O15018 2839 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 LRBAP50851 2863 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 DYSFO75923 2080 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 IGHV4-30-2A0A087WSY4 118 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 A0A1W2PPK0 400 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 PDCD5O14737 125 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 IGHV2-70P01814 119 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 CD37P11049 281 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 USF1P22415 310 aaPredicted RBP10.24□□□□□ -0.77
DDX55-210ENST00000543016 ZNF93P35789 620 aaPredicted RBP10.24□□□□□ -0.77
DDX55-210ENST00000543016 LOXL1Q08397 574 aaPredicted RBP10.24□□□□□ -0.77
DDX55-210ENST00000543016 DDI2Q5TDH0 399 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 TEX36Q5VZQ5 186 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 GLT8D1Q68CQ7 371 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 ZNF826PQ6ZT77 177 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 TGIF2LYQ8IUE0 185 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 GCSAMQ8N6F7 178 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 POC1AQ8NBT0 407 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 PXT1Q8NFP0 134 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 NPRL2Q8WTW4 380 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 GPER1Q99527 375 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 BPESC1Q9GZL8 116 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 DNTTIP1Q9H147 329 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 METTL17Q9H7H0 456 aaPredicted RBP10.24□□□□□ -0.77
DDX55-210ENST00000543016 SCOCQ9UIL1 159 aa10.24□□□□□ -0.77
DDX55-210ENST00000543016 IGKV1-27A0A075B6S5 117 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 TRAV8-7A0A075B6U6 113 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 IGHV3-64DA0A0J9YX35 117 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 OOEPA6NGQ2 149 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 TRAPPC2LH3BP13 241 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 ZNF780AO75290 641 aaPredicted RBP10.23□□□□□ -0.77
DDX55-210ENST00000543016 CYB5R3P00387 301 aaPredicted RBP10.23□□□□□ -0.77
DDX55-210ENST00000543016 PGA5P0DJD9 388 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 GLRA1P23415 457 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 MYL9P24844 172 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 CALRP27797 417 aaKnown RBP10.23□□□□□ -0.77
DDX55-210ENST00000543016 RPL5P46777 297 aaKnown RBP10.23□□□□□ -0.77
DDX55-210ENST00000543016 GPR176Q14439 515 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 MICBQ29980 383 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 SMIM21Q3B7S5 101 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 FIP1L1Q6UN15 594 aaKnown RBP10.23□□□□□ -0.77
DDX55-210ENST00000543016 ASCL4Q6XD76 172 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 SLC25A26Q70HW3 274 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 TPRA1Q86W33 373 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 ANGPTL5Q86XS5 388 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 CALHM1Q8IU99 346 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 WFDC11Q8NEX6 87 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 OR52N4Q8NGI2 321 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 OR51A2Q8NGJ7 313 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 OR13F1Q8NGS4 319 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 OR51F2Q8NH61 342 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 TMIGD2Q96BF3 282 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 YIPF6Q96EC8 236 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 CEP19Q96LK0 163 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 KCTD7Q96MP8 289 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 S100A13Q99584 98 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 NRIP2Q9BQI9 281 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 REG4Q9BYZ8 158 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 SEBOXQ9HB31 216 aaPredicted RBP10.23□□□□□ -0.77
DDX55-210ENST00000543016 TMEM165Q9HC07 324 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 TREM2Q9NZC2 230 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 GHRLQ9UBU3 117 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 TANC2Q9HCD6 1990 aa10.23□□□□□ -0.77
DDX55-210ENST00000543016 RHBDL1O75783 438 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 MAS1P04201 325 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 TFAP2AP05549 437 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 TMEM225BP0DP42 221 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 FOSL1P15407 271 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 PTGFRP43088 359 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ALDH3B2P48448 385 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 POU3F4P49335 361 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 CAPZA1P52907 286 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ZP1P60852 638 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ERVK11-1P61568 191 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 INSL4Q14641 139 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ZMYND11Q15326 602 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 C11orf91Q3C1V1 193 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ZNF404Q494X3 552 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 DMRTC1Q5HYR2 192 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 ATPAF1Q5TC12 328 aaPredicted RBP10.22□□□□□ -0.77
DDX55-210ENST00000543016 DCDC5Q6ZRR9 648 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 GPR141Q7Z602 305 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 LRRTM1Q86UE6 522 aa10.22□□□□□ -0.77
DDX55-210ENST00000543016 SATL1Q86VE3 508 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms