RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 DGUOKQ16854 277 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 TMEM244Q5VVB8 128 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 ASPHD2Q6ICH7 369 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 ZNF788Q6ZQV5 615 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 BTN2A1Q7KYR7 527 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 NLRC3Q7RTR2 1065 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 C1QL2Q7Z5L3 287 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 EGFL6Q8IUX8 553 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 BCL6BQ8N143 479 aaPredicted RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 CD177Q8N6Q3 437 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 GATAD2BQ8WXI9 593 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 C22orf15Q8WYQ4 148 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 SGCDQ92629 289 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 C12orf43Q96C57 262 aaKnown RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 TMEM80Q96HE8 168 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 TECTBQ96PL2 329 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 GAFA1Q96PS6 74 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 NUDT16L1Q9BRJ7 211 aaKnown RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 CHST5Q9GZS9 411 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 MTCH1Q9NZJ7 389 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 OR5V1Q9UGF6 321 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 ZNF222Q9UK12 451 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 DIMT1Q9UNQ2 313 aaKnown RBP8.06□□□□□ -1.12
YBX3-212ENST00000542002 MAB21L2Q9Y586 359 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 AUP1Q9Y679 476 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 HSPE1-MOB4S4R3N1 261 aa8.06□□□□□ -1.12
YBX3-212ENST00000542002 IGHV3OR16-10A0A075B7F0 116 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 OR2AT4A6NND4 320 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 NOS1APO75052 506 aaPredicted RBP8.05□□□□□ -1.12
YBX3-212ENST00000542002 INMTO95050 263 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 SFTPBP07988 381 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 ACAA1P09110 424 aaPredicted RBP8.05□□□□□ -1.12
YBX3-212ENST00000542002 PGA5P0DJD9 388 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 IGHV4-38-2P0DP08 117 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 GLRA1P23415 457 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 CEBPDP49716 269 aaPredicted RBP8.05□□□□□ -1.12
YBX3-212ENST00000542002 NPY4RP50391 375 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 GBX2P52951 348 aaPredicted RBP8.05□□□□□ -1.12
YBX3-212ENST00000542002 ERVK11-1P61568 191 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 IKZF1Q13422 519 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 TUSC1Q2TAM9 212 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 ACP7Q6ZNF0 438 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 ZNF573Q86YE8 665 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 C8orf59Q8N0T1 100 aaPredicted RBP8.05□□□□□ -1.12
YBX3-212ENST00000542002 POC1AQ8NBT0 407 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 ZNRF1Q8ND25 227 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 LY6G5BQ8NDX9 201 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 SETD9Q8NE22 299 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 BPIFB6Q8NFQ5 453 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 ZNF671Q8TAW3 534 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 NANPQ8TBE9 248 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 RPS4Y2Q8TD47 263 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 C10orf35Q96D05 121 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 NRIP2Q9BQI9 281 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 HES4Q9HCC6 221 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 TRIM36Q9NQ86 728 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 PLCXD1Q9NUJ7 323 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 FKBP14Q9NWM8 211 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 BABAM2Q9NXR7 383 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 NLKQ9UBE8 527 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 DNAJB11Q9UBS4 358 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 PSORS1C1Q9UIG5 152 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 HHLA2Q9UM44 414 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 CAB39Q9Y376 341 aaPredicted RBP8.05□□□□□ -1.12
YBX3-212ENST00000542002 PCDHGB5Q9Y5G0 923 aa8.05□□□□□ -1.12
YBX3-212ENST00000542002 TRBV2A0A0J9YWF9 115 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 RFPL4AA6NLU0 287 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 RFPL4AL1F8VTS6 287 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 H0YJX3 145 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 J3QT63 122 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 OGG1O15527 345 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 VENTXO95231 258 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 MMP9P14780 707 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 ATF1P18846 271 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 EPHA1P21709 976 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 FUT6P51993 359 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 FGF12P61328 243 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 IL24Q13007 206 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 UTS2BQ765I0 119 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 ZNF676Q8N7Q3 588 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 CCDC54Q8NEL0 328 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 OR13C3Q8NGS6 347 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 OR5AK2Q8NH90 309 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 PP6455Q8WZ26 134 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 ST8SIA4Q92187 359 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 TMIGD2Q96BF3 282 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 SPACA5Q96QH8 159 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 TBX15Q96SF7 602 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 SLC6A7Q99884 636 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 PLEKHA1Q9HB21 404 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 PAK1IP1Q9NWT1 392 aaPredicted RBP8.04□□□□□ -1.12
YBX3-212ENST00000542002 RASL12Q9NYN1 266 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 ZNF69Q9UC07 566 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 RPUSD1Q9UJJ7 312 aaKnown RBP8.04□□□□□ -1.12
YBX3-212ENST00000542002 SLC7A11Q9UPY5 501 aa8.04□□□□□ -1.12
YBX3-212ENST00000542002 IGKV1-12A0A0C4DH73 117 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 TMEM212A6NML5 194 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 SIGLEC5O15389 551 aa8.03□□□□□ -1.12
YBX3-212ENST00000542002 GATBO75879 557 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms