RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RPUSD1Q9UJJ7 312 aaKnown RBP8.04□□□□□ -1.12
CHFR-220ENST00000541817 HERC2O95714 4834 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 IGHV1-69DA0A0B4J2H0 117 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 A0A1W2PRD5 423 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 A0A1W2PRF3 423 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 A0A1W2PRM7 423 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 A0A1W2PRX2 142 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 MEIOCA2RUB1 952 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ADARB2-AS1A8MUL3 147 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 C22orf46C9J442 243 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 IMPA2O14732 288 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ARPC3O15145 178 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ARL6IP5O75915 188 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 IGF2P01344 180 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 HLA-DQB1P01920 261 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 CD1AP06126 327 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 MDH2P40926 338 aaKnown RBP8.03□□□□□ -1.12
CHFR-220ENST00000541817 BPIFB3P59826 476 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ACSM3Q53FZ2 586 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 NKAPLQ5M9Q1 402 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 FAM201AQ5SY85 155 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 HACD4Q5VWC8 232 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ZNF57Q68EA5 555 aaPredicted RBP8.03□□□□□ -1.12
CHFR-220ENST00000541817 RPL22L1Q6P5R6 122 aaKnown RBP8.03□□□□□ -1.12
CHFR-220ENST00000541817 PLET1Q6UQ28 207 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 LYPD2Q6UXB3 125 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 RDH10Q8IZV5 341 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 SYS1Q8N2H4 156 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 SLC25A40Q8TBP6 338 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ITLN1Q8WWA0 313 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 MAP6Q96JE9 813 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 TMEM43Q9BTV4 400 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 ULBP2Q9BZM5 246 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 BCL2L14Q9BZR8 327 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 HDHD2Q9H0R4 259 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 C11orf54Q9H0W9 315 aaPredicted RBP8.03□□□□□ -1.12
CHFR-220ENST00000541817 PPP1R3EQ9H7J1 279 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 NEK6Q9HC98 313 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 EXOSC3Q9NQT5 275 aaKnown RBP8.03□□□□□ -1.12
CHFR-220ENST00000541817 EXTL2Q9UBQ6 330 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 VPREB3Q9UKI3 123 aa8.03□□□□□ -1.12
CHFR-220ENST00000541817 SIRT4Q9Y6E7 314 aaPredicted RBP8.03□□□□□ -1.12
CHFR-220ENST00000541817 IGHV3-64DA0A0J9YX35 117 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 FAM240BA0A1B0GVZ2 78 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 CENPXA8MT69 81 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 A8MVM7 634 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 MCIDASD6RGH6 385 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 FTCDNL1E5RQL4 147 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 P2RY10O00398 339 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 PDCD5O14737 125 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 OGG1O15527 345 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 FBXO24O75426 580 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 CYB5R3P00387 301 aaPredicted RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 HIST1H2ABP04908 130 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 GYPBP06028 91 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 CLUP10909 449 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 MMP9P14780 707 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 HIST1H1CP16403 213 aaKnown RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 ELK1P19419 428 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 RAB3BP20337 219 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 HLA-DMAP28067 261 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 PYCR1P32322 319 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 DDOSTP39656 456 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 OR12D2P58182 307 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 PITPNAQ00169 270 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 NDUFA5Q16718 116 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 TBC1D28Q2M2D7 210 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 ZNF718Q3SXZ3 478 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 CDONQ4KMG0 1287 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 CCDC58Q4VC31 144 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 DMKNQ6E0U4 476 aaPredicted RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 BAIAP2L2Q6UXY1 529 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 HIST3H2AQ7L7L0 130 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 ZNF101Q8IZC7 436 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 SDR9C7Q8NEX9 313 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 OR6N1Q8NGY5 312 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 HAVCR2Q8TDQ0 301 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 PHYHIPQ92561 330 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 HIST1H2ACQ93077 130 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 NEIL1Q96FI4 390 aaPredicted RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 ZNF486Q96H40 463 aaPredicted RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 CITED2Q99967 270 aaPredicted RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 TMEM246Q9BRR3 403 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 PTDSS2Q9BVG9 487 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 OR2J1Q9GZK6 312 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 C12orf10Q9HB07 376 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 RABL2AQ9UBK7 228 aaPredicted RBP8.02□□□□□ -1.13
CHFR-220ENST00000541817 RABL2BQ9UNT1 228 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 PPP1R3CQ9UQK1 317 aa8.02□□□□□ -1.13
CHFR-220ENST00000541817 TRAV1-2A0A0B4J238 106 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 SHISA3A0PJX4 238 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 ZNF879B4DU55 563 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 E9PI62 339 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 TMEM178BH3BS89 294 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 PLA2G10O15496 165 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 LYRM1O43325 122 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 GLCEO94923 617 aa8.01□□□□□ -1.13
CHFR-220ENST00000541817 AHSA1O95433 338 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms