RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DEFA3P59666 94 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 ALKBH6Q3KRA9 238 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 TMEM255AQ5JRV8 349 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 C1orf174Q8IYL3 243 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 GCDHQ92947 438 aaPredicted RBP23.7■■□□□ 1.39
CCM2-218ENST00000541586 TRIM63Q969Q1 353 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 ITPKCQ96DU7 683 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 ROS1P08922 2347 aa23.7■■□□□ 1.39
CCM2-218ENST00000541586 PTPN13Q12923 2485 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 TRAV18A0A075B6X5 111 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 IQCF6A8MYZ5 107 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 SPRY1O43609 319 aaPredicted RBP23.7■■□□□ 1.38
CCM2-218ENST00000541586 GSTZ1O43708 216 aaPredicted RBP23.7■■□□□ 1.38
CCM2-218ENST00000541586 CRTAPO75718 401 aaPredicted RBP23.7■■□□□ 1.38
CCM2-218ENST00000541586 MPIG6BO95866 241 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 PLATP00750 562 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 PTHLHP12272 177 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 SELEP16581 610 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 CA6P23280 308 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 MOGAT2Q3SYC2 334 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 RNASE12Q5GAN4 147 aaKnown RBP23.7■■□□□ 1.38
CCM2-218ENST00000541586 CENPSQ8N2Z9 138 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 C19orf18Q8NEA5 215 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 SMIM4Q8WVI0 70 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 OR5P3Q8WZ94 311 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 YIPF5Q969M3 257 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 HIST1H2AAQ96QV6 131 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 CLEC4MQ9H2X3 399 aaPredicted RBP23.7■■□□□ 1.38
CCM2-218ENST00000541586 BANF2Q9H503 90 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 SPEF1Q9Y4P9 236 aa23.7■■□□□ 1.38
CCM2-218ENST00000541586 A0A0A6YYH2 397 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 LINC00854A0A1B0GVQ3 168 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 A6NJ64 397 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 ANGPTL7O43827 346 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 GPM6AP51674 278 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 OXA1LQ15070 435 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 DCDC5Q6ZRR9 648 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 OR5A2Q8NGI9 324 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 OR10K1Q8NGX5 313 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 SETD6Q8TBK2 473 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 C15orf40Q8WUR7 153 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 TMEM59Q9BXS4 323 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 CST11Q9H112 138 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 LPAR5Q9H1C0 372 aa23.69■■□□□ 1.38
CCM2-218ENST00000541586 ELL3Q9HB65 397 aaPredicted RBP23.69■■□□□ 1.38
CCM2-218ENST00000541586 A0A1W2PPR1 153 aa23.68■■□□□ 1.38
CCM2-218ENST00000541586 FAM221AA4D161 298 aa23.68■■□□□ 1.38
CCM2-218ENST00000541586 PDZK1IP1Q13113 114 aa23.68■■□□□ 1.38
CCM2-218ENST00000541586 SNTB2Q13425 540 aaKnown RBP23.68■■□□□ 1.38
CCM2-218ENST00000541586 TMEM204Q9BSN7 226 aa23.68■■□□□ 1.38
CCM2-218ENST00000541586 AUNIPQ9H7T9 357 aa23.68■■□□□ 1.38
CCM2-218ENST00000541586 CD3GP09693 182 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 TRIM16LQ309B1 348 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 ZNF718Q3SXZ3 478 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 ASCL4Q6XD76 172 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 CALHM1Q8IU99 346 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 CISD1Q9NZ45 108 aaKnown RBP23.67■■□□□ 1.38
CCM2-218ENST00000541586 ZNF732B4DXR9 585 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 GABARAPH6UMI1 98 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 RAB27BO00194 218 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 SERPINA2P20848 420 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 INPP1P49441 399 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 FABP6P51161 128 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 MRPS10P82664 201 aaKnown RBP23.67■■□□□ 1.38
CCM2-218ENST00000541586 ASAH1Q13510 395 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 MBNL2Q5VZF2 373 aaKnown RBP23.67■■□□□ 1.38
CCM2-218ENST00000541586 RAB12Q6IQ22 244 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 CDH24Q86UP0 819 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 OR52I2Q8NH67 350 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 LILRB1Q8NHL6 650 aaPredicted RBP23.67■■□□□ 1.38
CCM2-218ENST00000541586 RNF170Q96K19 258 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 NICN1Q9BSH3 213 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 METTL9Q9H1A3 318 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 PURGQ9UJV8 347 aaKnown RBP23.67■■□□□ 1.38
CCM2-218ENST00000541586 FZR1Q9UM11 496 aa23.67■■□□□ 1.38
CCM2-218ENST00000541586 CELSR2Q9HCU4 2923 aa23.66■■□□□ 1.38
CCM2-218ENST00000541586 PLA2G10O15496 165 aa23.66■■□□□ 1.38
CCM2-218ENST00000541586 GOSR1O95249 250 aa23.66■■□□□ 1.38
CCM2-218ENST00000541586 ZNF672Q499Z4 452 aaPredicted RBP23.66■■□□□ 1.38
CCM2-218ENST00000541586 A0A0A6YYD4 124 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 IGKV1-12A0A0C4DH73 117 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 E7EQL1 145 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 IGKV1D-12P01611 117 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 MGMTP16455 207 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 KITLGP21583 273 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 GCH1P30793 250 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 VEGFCP49767 419 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 RSU1Q15404 277 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 ZNF57Q68EA5 555 aaPredicted RBP23.65■■□□□ 1.38
CCM2-218ENST00000541586 RGS7BPQ6MZT1 257 aaPredicted RBP23.65■■□□□ 1.38
CCM2-218ENST00000541586 PXT1Q8NFP0 134 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 C14orf79Q96F83 325 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 CA10Q9NS85 328 aa23.65■■□□□ 1.38
CCM2-218ENST00000541586 MEIOCA2RUB1 952 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 SCGNO76038 276 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 PTTG1O95997 202 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 HAAOP46952 286 aa23.64■■□□□ 1.38
CCM2-218ENST00000541586 RPS27AP62979 156 aaKnown RBP23.64■■□□□ 1.38
CCM2-218ENST00000541586 NKX6-1P78426 367 aaPredicted RBP23.64■■□□□ 1.38
CCM2-218ENST00000541586 ZNF611Q8N823 705 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms