RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 GDF2Q9UK05 429 aaPredicted RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 CARHSP1Q9Y2V2 147 aaKnown RBP12.6□□□□□ -0.39
SFSWAP-210ENST00000541286 ALG1L2C9J202 215 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 ATXN7O15265 892 aaPredicted RBP12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 SFTPDP35247 375 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 FHITP49789 147 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 MECP2P51608 486 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 ZNF124Q15973 351 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 PYY3Q5JQD4 70 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 RPL7L1Q6DKI1 246 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 GRINAQ7Z429 371 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 ABHD12BQ7Z5M8 362 aaPredicted RBP12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 TMEM229BQ8NBD8 167 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 CCDC54Q8NEL0 328 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 IMMP1LQ96LU5 166 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 WASF3Q9UPY6 502 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 ZNF20P17024 532 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 HSD11B1P28845 292 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 RPS10P46783 165 aaKnown RBP12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 MPPED2Q15777 294 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 POM121Q96HA1 1249 aa12.59□□□□□ -0.39
SFSWAP-210ENST00000541286 A0A1W2PNR3 127 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 C7orf77A4D0Y5 90 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 NME2P1O60361 137 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 WISP2O76076 250 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 MT-ATP6P00846 226 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 CD74P04233 296 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 HCKP08631 526 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 PSMB6P28072 239 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 LAP3P28838 519 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 CCL11P51671 97 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 ARFRP1Q13795 201 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 DEFB109BQ30KR1 87 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 TEX30Q5JUR7 227 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 SPINK14Q6IE38 97 aa12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 VSX1Q9NZR4 365 aaPredicted RBP12.58□□□□□ -0.39
SFSWAP-210ENST00000541286 K7EM74 188 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 SDCBPO00560 298 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 FAM157CP0CG43 387 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 OR13C7P0DN81 318 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 Q3ZCU0 254 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF561Q8N587 486 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 SLAMF6Q96DU3 332 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 CCNL2Q96S94 520 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 PHB2Q99623 299 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 ST6GALNAC5Q9BVH7 336 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 SPACA1Q9HBV2 294 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 MMP26Q9NRE1 261 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 IGSF10Q6WRI0 2623 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 DOCK7Q96N67 2140 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 FBP1P09467 338 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 CD79AP11912 226 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF616Q08AN1 781 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 ACTBL2Q562R1 376 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 C11orf40Q8WZ69 217 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 WDR54Q9H977 334 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 SEBOXQ9HB31 216 aaPredicted RBP12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 MYOTQ9UBF9 498 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 RAXQ9Y2V3 346 aa12.58□□□□□ -0.4
SFSWAP-210ENST00000541286 C9orf170A2RU37 121 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 MEGF11A6BM72 1044 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 C1QL1O75973 258 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 CD8AP01732 235 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 HSF1Q00613 529 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 TMEM244Q5VVB8 128 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 PGAP1Q75T13 922 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 TOLLIPQ9H0E2 274 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 BLACEA4D250 179 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF727A8MUV8 499 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 RAB27BO00194 218 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 WRBO00258 174 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 TSPAN2O60636 221 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 SFTPBP07988 381 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 HOXB5P09067 269 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 IFI6P09912 130 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 FOXF1Q12946 379 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 SPTAN1Q13813 2472 aaKnown RBP12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 OR10D4PQ8NGN7 298 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 PSMF1Q92530 271 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 KIRREL1Q96J84 757 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 PRRT1Q99946 306 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 RNF126Q9BV68 326 aa12.57□□□□□ -0.4
SFSWAP-210ENST00000541286 MS4A18H0YCH9 400 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 GATCO43716 136 aaKnown RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 GUSBP08236 651 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF735P0CB33 412 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 VSIG8P0DPA2 414 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 ZNF93P35789 620 aaPredicted RBP12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 GSK3AP49840 483 aa12.56□□□□□ -0.4
SFSWAP-210ENST00000541286 ROM1Q03395 351 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms