RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 C11orf91Q3C1V1 193 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ACTBL2Q562R1 376 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 PABPC1L2AQ5JQF8 200 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 AGAP6Q5VW22 663 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 AWAT2Q6E213 333 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ZNF774Q6NX45 483 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 TREML4Q6UXN2 200 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 Q6ZT83 130 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 SNX29P2Q8IUI4 249 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 WDFY1Q8IWB7 410 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ZNF101Q8IZC7 436 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 GABRG1Q8N1C3 465 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 FAM169BQ8N8A8 192 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ZSCAN4Q8NAM6 433 aaPredicted RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 OR13C9Q8NGT0 318 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 OR56B4Q8NH76 319 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 YIPF5Q969M3 257 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 TRIM63Q969Q1 353 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 SPSB4Q96A44 273 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 SLC25A28Q96A46 364 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ZNF775Q96BV0 537 aaPredicted RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 SLC25A38Q96DW6 304 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ADAT3Q96EY9 351 aaPredicted RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 PIK3IP1Q96FE7 263 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 LRRC46Q96FV0 321 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 REEP6Q96HR9 211 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 TRIB1Q96RU8 372 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ABHD1Q96SE0 405 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 GFI1Q99684 422 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 MARVELD1Q9BSK0 173 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 CACNG6Q9BXT2 260 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 C11orf54Q9H0W9 315 aaPredicted RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 RHOFQ9HBH0 211 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 SPRR3Q9UBC9 169 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 MRPS28Q9Y2Q9 187 aaKnown RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 RBMX2Q9Y388 322 aaKnown RBP7.2□□□□□ -1.26
CHD4-208ENST00000540960 N6AMT1Q9Y5N5 214 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 ALPK2Q86TB3 2170 aa7.2□□□□□ -1.26
CHD4-208ENST00000540960 NCKAP5O14513 1909 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 CADP27708 2225 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 TRAV18A0A075B6X5 111 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 A0A096LNT2 108 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 ZNF816-ZNF321PA0A0X1KG74 233 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 TMEM272A0A1B0GTI8 110 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 H7C417 338 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 CA11O75493 328 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 CD79AP11912 226 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 STOMP27105 288 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 SLC6A1P30531 599 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 GDNFP39905 211 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 PTGFRP43088 359 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 RBP2P50120 134 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 TAS2R19P59542 299 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 RAB1AP62820 205 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 MZT1Q08AG7 82 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 DNM1P46Q6ZS02 220 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 COLCA1Q6ZS62 124 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 BEND4Q6ZU67 534 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 MRPL21Q7Z2W9 205 aaKnown RBP7.19□□□□□ -1.26
CHD4-208ENST00000540960 ANGPTL5Q86XS5 388 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 OR51A2Q8NGJ7 313 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 OR1K1Q8NGR3 316 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 BCL2L2Q92843 193 aaPredicted RBP7.19□□□□□ -1.26
CHD4-208ENST00000540960 SGK3Q96BR1 496 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 MED30Q96HR3 178 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 WNT5BQ9H1J7 359 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 CNTD2Q9H8S5 307 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 GPN1Q9HCN4 374 aaPredicted RBP7.19□□□□□ -1.26
CHD4-208ENST00000540960 PLSCR4Q9NRQ2 329 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 ETAA1Q9NY74 926 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 MTFP1Q9UDX5 166 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 CLEC4AQ9UMR7 237 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 PIGLQ9Y2B2 252 aa7.19□□□□□ -1.26
CHD4-208ENST00000540960 LINC00854A0A1B0GVQ3 168 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 CIB4A0PJX0 185 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 ANKRD20A5PA0PJZ0 165 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 HMX3A6NHT5 357 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 LDLRAD4O15165 306 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 PLA2G10O15496 165 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 AKR7A2O43488 359 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 TCF21O43680 179 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 CST4P01036 141 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 NRASP01111 189 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 IL2RAP01589 272 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 CSTBP04080 98 aaKnown RBP7.18□□□□□ -1.26
CHD4-208ENST00000540960 MELTFP08582 738 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 AKAIN1P0CW23 69 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 CPT2P23786 658 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 LOXP28300 417 aaPredicted RBP7.18□□□□□ -1.26
CHD4-208ENST00000540960 CEACAM8P31997 349 aaPredicted RBP7.18□□□□□ -1.26
CHD4-208ENST00000540960 RFX2P48378 723 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 CLDN12P56749 244 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 KLF9Q13886 244 aaPredicted RBP7.18□□□□□ -1.26
CHD4-208ENST00000540960 OR8B8Q15620 311 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 KISS1Q15726 138 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 TMEM249Q2WGJ8 235 aa7.18□□□□□ -1.26
CHD4-208ENST00000540960 GFOD2Q3B7J2 385 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms