RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 CNTRLQ7Z7A1 2325 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 RTTNQ86VV8 2226 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 RFPL4AA6NLU0 287 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 FIGNL2A6NMB9 653 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 RFPL4AL1F8VTS6 287 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 L7N2F9 121 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 PPP3CBP16298 524 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 ATP1A1-AS1Q5TC04 95 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 NSUN5P2Q63ZY6 315 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 TECTBQ96PL2 329 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 GPR132Q9UNW8 380 aa11.95□□□□□ -0.5
RTN3-210ENST00000540798 DBX1A6NMT0 343 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 ZNF587BE7ETH6 402 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
RTN3-210ENST00000540798 NRASP01111 189 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 IGHV3-9P01782 118 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 TAS2R31P59538 309 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 CLLU1Q5K131 121 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 OR8H3Q8N146 312 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 TMEM185AQ8NFB2 350 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 HSF4Q9ULV5 492 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 LIPGQ9Y5X9 500 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 LOC100509620A0A075B734 347 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 MSTNO14793 375 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 CD46P15529 392 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 RPA2P15927 270 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 RBP2P50120 134 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 MARCH1Q8TCQ1 289 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 CALHM2Q9HA72 323 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 UBQLN2Q9UHD9 624 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 OSGIN2Q9Y236 505 aa11.94□□□□□ -0.5
RTN3-210ENST00000540798 TNRC6AQ8NDV7 1962 aaKnown RBP11.94□□□□□ -0.5
RTN3-210ENST00000540798 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 GLAP06280 429 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 S100A11P31949 105 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 FUT6P51993 359 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 TAS2R46P59540 309 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 ARFRP1Q13795 201 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 C11orf88Q6PI97 169 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 PXT1Q8NFP0 134 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 ZNF816-ZNF321PA0A0X1KG74 233 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 ZNF503-AS2A6NEH8 195 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 TMEM225BP0DP42 221 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 FOXG1P55316 489 aaPredicted RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 HLXQ14774 488 aaPredicted RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 TMUB2Q71RG4 321 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 OR5H2Q8NGV7 314 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 OR13G1Q8NGZ3 307 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 ZDHHC11Q9H8X9 412 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 FAM230AA0A1W2PPH8 454 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 LINC00587B1AMM8 73 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 RRP8O43159 456 aaKnown RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 AMY2BP19961 511 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 FPR2P25090 351 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 NUBP1P53384 320 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 SNU13P55769 128 aaKnown RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 TGIF1Q15583 401 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 OVCH2Q7RTZ1 564 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 EMG1Q92979 244 aaKnown RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 APH1AQ96BI3 265 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 BORCS8Q96FH0 119 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 WDYHV1Q96HA8 205 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 ZNF230Q9UIE0 474 aaPredicted RBP11.93□□□□□ -0.5
RTN3-210ENST00000540798 MAB21L2Q9Y586 359 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 FREM1Q5H8C1 2179 aa11.93□□□□□ -0.5
RTN3-210ENST00000540798 IGKV1-12A0A0C4DH73 117 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 ARGFXA6NJG6 315 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 SPRY1O43609 319 aaPredicted RBP11.92□□□□□ -0.5
RTN3-210ENST00000540798 IGKV1D-12P01611 117 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 HOXD4P09016 255 aaPredicted RBP11.92□□□□□ -0.5
RTN3-210ENST00000540798 LIPCP11150 499 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 SLC25A4P12235 298 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 GMFBP60983 142 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 IL13RA1P78552 427 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 SORDQ00796 357 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 NHLRC3Q5JS37 347 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 C6orf201Q7Z4U5 140 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 C12orf57Q99622 126 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 PHB2Q99623 299 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 ZNF552Q9H707 407 aaPredicted RBP11.92□□□□□ -0.5
RTN3-210ENST00000540798 ARPC5O15511 151 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 FTH1P19P0C7X4 201 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 PRSS12P56730 875 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 FGL1Q08830 312 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 TMEM128Q5BJH2 165 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 RPUSD3Q6P087 351 aaKnown RBP11.92□□□□□ -0.5
RTN3-210ENST00000540798 NUFIP2Q7Z417 695 aaKnown RBP11.92□□□□□ -0.5
RTN3-210ENST00000540798 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
RTN3-210ENST00000540798 ASCL3Q9NQ33 180 aa11.92□□□□□ -0.5
RTN3-210ENST00000540798 ANGPTL7O43827 346 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms