RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ALKBH4Q9NXW9 302 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 UNC80Q8N2C7 3258 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 SCAF4O95104 1147 aaKnown RBP11.44□□□□□ -0.58
MSH6-210ENST00000540021 WISP1O95388 367 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 FABP4P15090 132 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 HTR5AP47898 357 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 LILRB2Q8N423 598 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 ZNF519Q8TB69 540 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 PECRQ9BY49 303 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 PRRG4Q9BZD6 226 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 CA14Q9ULX7 337 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 A0A1B0GX78 115 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 A6NCN8 305 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 TP53I11O14683 189 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 HSD17B6O14756 317 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 CMTM1Q8IZ96 169 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 GJC3Q8NFK1 279 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 OR1L3Q8NH93 324 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 ERGIC1Q969X5 290 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 CRLF2Q9HC73 371 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 ZNF107Q9UII5 783 aaPredicted RBP11.44□□□□□ -0.58
MSH6-210ENST00000540021 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
MSH6-210ENST00000540021 ABCA7Q8IZY2 2146 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 HPNP05981 417 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SERPINE2P07093 398 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 PATE4P0C8F1 98 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 HKR1P10072 659 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 MDKP21741 143 aaPredicted RBP11.43□□□□□ -0.58
MSH6-210ENST00000540021 SULT1A2P50226 295 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 CDCP2Q5VXM1 449 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 OR2T2Q6IF00 324 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 TCEAL6Q6IPX3 200 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 ALKBH2Q6NS38 261 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 PAQR4Q8N4S7 273 aaPredicted RBP11.43□□□□□ -0.58
MSH6-210ENST00000540021 OR51H1Q8NH63 302 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SH3BGRL3Q9H299 93 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 TMPRSS5Q9H3S3 457 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 LIPGQ9Y5X9 500 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
MSH6-210ENST00000540021 PNLIPP16233 465 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 EFNA3P52797 238 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 ZNF266Q14584 549 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 LRRK1Q38SD2 2015 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 ZNF528Q3MIS6 628 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 PHOSPHO2Q8TCD6 241 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 GPHA2Q96T91 129 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SPIN2AQ99865 258 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SSX3Q99909 188 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 GABRG3Q99928 467 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SPIN2BQ9BPZ2 258 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 BARX1Q9HBU1 254 aaPredicted RBP11.43□□□□□ -0.58
MSH6-210ENST00000540021 SLC2A8Q9NY64 477 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 F10P00742 488 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
MSH6-210ENST00000540021 GRB2P62993 217 aaKnown RBP11.43□□□□□ -0.58
MSH6-210ENST00000540021 TESK1Q15569 626 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 OR10G3Q8NGC4 313 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 ZNF721Q8TF20 911 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 ST8SIA1Q92185 356 aa11.43□□□□□ -0.58
MSH6-210ENST00000540021 PHOX2AO14813 284 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 IL2RAP01589 272 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 PTGER4P35408 488 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 PPP1CCP36873 323 aaKnown RBP11.42□□□□□ -0.58
MSH6-210ENST00000540021 HABP2Q14520 560 aaPredicted RBP11.42□□□□□ -0.58
MSH6-210ENST00000540021 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 FBXL14Q8N1E6 418 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 NOXO1Q8NFA2 376 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 PARP11Q9NR21 331 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 ESPL1Q14674 2120 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 CACNA1DQ01668 2161 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 A0A0U1RQK1 487 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 PQLC2LA1A4F0 135 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 SERPINE3A8MV23 424 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 MS4A18H0YCH9 400 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 ZNF217O75362 1048 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 TK1P04183 234 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 KLK2P20151 261 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 FOXK1P85037 733 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 MS4A18Q3C1V0 323 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 C1QL2Q7Z5L3 287 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 UBAC2Q8NBM4 344 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
MSH6-210ENST00000540021 OR6C1Q96RD1 312 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 MOB1AQ9H8S9 216 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 COA4Q9NYJ1 87 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 ZFAND5O76080 213 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 MSR1P21757 451 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 ELLP55199 621 aaPredicted RBP11.42□□□□□ -0.58
MSH6-210ENST00000540021 ECH1Q13011 328 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 ASPHD2Q6ICH7 369 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 OR11L1Q8NGX0 322 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 HPSE2Q8WWQ2 592 aa11.42□□□□□ -0.58
MSH6-210ENST00000540021 PTX4Q96A99 478 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms