RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SLC37A3Q8NCC5 494 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 OR11H6Q8NGC7 330 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 OR13D1Q8NGV5 346 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 GNPDA2Q8TDQ7 276 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 RNF133Q8WVZ7 376 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 HPSE2Q8WWQ2 592 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 PGAM5Q96HS1 289 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 KCTD14Q9BQ13 255 aaPredicted RBP9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 BRD7Q9NPI1 651 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 DNAJC27Q9NZQ0 273 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 ZMAT5Q9UDW3 170 aaKnown RBP9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 POMPQ9Y244 141 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 TENM2Q9NT68 2774 aa9.31□□□□□ -0.92
CLSTN3-209ENST00000539982 RYR2Q92736 4967 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 BIRC6Q9NR09 4857 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ZNF732B4DXR9 585 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 SLC1A7O00341 560 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ZFPL1O95159 310 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 CHRM2P08172 466 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 AZGP1P25311 298 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 LMO1P25800 156 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 PRDX2P32119 198 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 BLVRAP53004 296 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 DLX6P56179 175 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 GNG3P63215 75 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 TSPAN31Q12999 210 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ZNF273Q14593 569 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 KPNB1Q14974 876 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ZNF626Q68DY1 528 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ACP7Q6ZNF0 438 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 OR4X2Q8NGF9 303 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 OR52L1Q8NGH7 329 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ASB9Q96DX5 294 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 MCRIP2Q9BUT9 160 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 ABHD6Q9BV23 337 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 EGLN3Q9H6Z9 239 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 DCAF13Q9NV06 445 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 PCDHGB5Q9Y5G0 923 aa9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
CLSTN3-209ENST00000539982 GYPBP06028 91 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 JUNBP17275 347 aaPredicted RBP9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 OPRL1P41146 370 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 ACTR3P61158 418 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 DGCR2P98153 550 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 SLC34A1Q06495 639 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 FLOT2Q14254 428 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 TRIM25Q14258 630 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 CEACAM21Q3KPI0 293 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 GLYATQ6IB77 296 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 ZNF770Q6IQ21 691 aaPredicted RBP9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 LCN8Q6JVE9 175 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 RPL13AP3Q6NVV1 102 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 UNQ9370/PRO34162Q6UXP9 181 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 KRT74Q7RTS7 529 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 C16orf82Q7Z2V1 217 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 AQP3Q92482 292 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 LYZL4Q96KX0 146 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 NMNAT2Q9BZQ4 307 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 SAMD4AQ9UPU9 718 aaKnown RBP9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 HILPDAQ9Y5L2 63 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 CDH10Q9Y6N8 788 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 STAB2Q8WWQ8 2551 aa9.29□□□□□ -0.92
CLSTN3-209ENST00000539982 RBP4P02753 201 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 TK1P04183 234 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 H2BFMP0C1H6 154 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 CCDC159P0C7I6 412 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 CLUP10909 449 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 SPI1P17947 270 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 MS4A2Q01362 244 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 DYNC1I2Q13409 638 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 RIPK1Q13546 671 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 CRMP1Q14194 572 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 SMIM21Q3B7S5 101 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 KHDC1LQ5JSQ8 128 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 NKAPLQ5M9Q1 402 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 CASC10Q5T4H9 136 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 LINC01590Q5TEZ4 76 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 DHFR2Q86XF0 187 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 C10orf67Q8IYJ2 551 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 OR51D1Q8NGF3 324 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 OR5A2Q8NGI9 324 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 OR6K6Q8NGW6 343 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 STMN2Q93045 179 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 AKR1E2Q96JD6 320 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 LRGUKQ96M69 825 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 AMELYQ99218 206 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 IL20Q9NYY1 176 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 ACTR3BQ9P1U1 418 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 MAGEL2Q9UJ55 1249 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 MINOS1-NBL1R4GNA1 71 aa9.28□□□□□ -0.92
CLSTN3-209ENST00000539982 GMNNO75496 209 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 LPLP06858 475 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 ZNF728P0DKX0 622 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 IGHV1-8P0DP01 117 aa9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 PIPP12273 146 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-209ENST00000539982 CEBPDP49716 269 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms