RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	PGA5	P0DJD9	388 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	IER3	P46695	156 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	GABRA2	P47869	451 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	ISL1	P61371	349 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	ZNF85	Q03923	595 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	FIP1L1	Q6UN15	594 aa	Known RBP	13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	LDLRAD3	Q86YD5	345 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	PRSS35	Q8N3Z0	413 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	H1FX	Q92522	213 aa	Known RBP	13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	RBM4B	Q9BQ04	359 aa	Known RBP	13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	NRIP2	Q9BQI9	281 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	RASL12	Q9NYN1	266 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	C1RL	Q9NZP8	487 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	MMP24	Q9Y5R2	645 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	POMT1	Q9Y6A1	747 aa		13.75	□□□□□ -0.21
DDB1-215	ENST00000539712	METTL15	A6NJ78	407 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	RFPL4A	A6NLU0	287 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	POM121C	A8CG34	1229 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	RFPL4AL1	F8VTS6	287 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712		J3QRE1	110 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712		J3QT63	122 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	SULT1C4	O75897	302 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	KRT8	P05787	483 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	MPZ	P25189	248 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	HAAO	P46952	286 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	KLRD1	Q13241	179 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	TMED1	Q13445	227 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	KPNB1	Q14974	876 aa	Known RBP	13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	HCP5	Q6MZN7	132 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	ZNF573	Q86YE8	665 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	CALHM1	Q8IU99	346 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	YIPF7	Q8N8F6	280 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	OR10H4	Q8NGA5	316 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	SSMEM1	Q8WWF3	244 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	HES4	Q9HCC6	221 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	USE1	Q9NZ43	259 aa		13.74	□□□□□ -0.21
DDB1-215	ENST00000539712	NDUFB7	P17568	137 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	ERVK11-1	P61568	191 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	UBE2V2	Q15819	145 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	ODF4	Q2M2E3	257 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	PRR31	Q5SQ13	230 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	SLC25A30	Q5SVS4	291 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	ANGPTL5	Q86XS5	388 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	CMTM4	Q8IZR5	234 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	PNKD	Q8N490	385 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	TRUB1	Q8WWH5	349 aa	Known RBP	13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	AJUBA	Q96IF1	538 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	HRASLS5	Q96KN8	279 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	C19orf12	Q9NSK7	152 aa		13.73	□□□□□ -0.21
DDB1-215	ENST00000539712	IGKV1-27	A0A075B6S5	117 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712		F8VVB4	439 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712		F8VWA3	439 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712		H3BSH0	61 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712		M0R1W7	72 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	EI24	O14681	340 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	SPRY1	O43609	319 aa	Predicted RBP	13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	ENTPD6	O75354	484 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	NDUFA7	O95182	113 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	PRDX2	P32119	198 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	KIR3DL2	P43630	455 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	CEBPD	P49716	269 aa	Predicted RBP	13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	SNRPG	P62308	76 aa	Known RBP	13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	TAF9	Q16594	264 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	RDH10	Q8IZV5	341 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	C11orf42	Q8N5U0	333 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	NPRL2	Q8WTW4	380 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	RFK	Q969G6	155 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	SLITRK2	Q9H156	845 aa		13.72	□□□□□ -0.21
DDB1-215	ENST00000539712	TRBV23-1	A0A0A0MS06	115 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712		A0A1W2PRD5	423 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712		A0A1W2PRF3	423 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712		A0A1W2PRM7	423 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	ANKRD61	A6NGH8	418 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	NPFF	O15130	113 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	GPR137B	O60478	399 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	RAG2	P55895	527 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	CDC42	P60953	191 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	SRSF4	Q08170	494 aa	Known RBP	13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	SMIM21	Q3B7S5	101 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	TP53I3	Q53FA7	332 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	BATF2	Q8N1L9	274 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	TMEM185A	Q8NFB2	350 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	TBC1D15	Q8TC07	691 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	DYRK2	Q92630	601 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	MBOAT4	Q96T53	435 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	ZNF696	Q9H7X3	374 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	METTL8	Q9H825	291 aa	Known RBP	13.71	□□□□□ -0.21
DDB1-215	ENST00000539712	AASS	Q9UDR5	926 aa		13.71	□□□□□ -0.21
DDB1-215	ENST00000539712		A0A1W2PQ09	198 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	SYT7	O43581	403 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	GABRB1	P18505	474 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	ATP6V1E1	P36543	226 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	ALDH3A2	P51648	485 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	UBE2E1	P51965	193 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	GUCA2A	Q02747	115 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	IL24	Q13007	206 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	OCLN	Q16625	522 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	ZIK1	Q3SY52	487 aa	Predicted RBP	13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	TMEM200B	Q69YZ2	307 aa		13.7	□□□□□ -0.22
DDB1-215	ENST00000539712	CBR4	Q8N4T8	237 aa		13.7	□□□□□ -0.22

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