RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 RANBP1P43487 201 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 CAV3P56539 151 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 CLVS2Q5SYC1 327 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 IDNKQ5T6J7 187 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 MOB3CQ70IA8 216 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 CALHM1Q8IU99 346 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 OR51A2Q8NGJ7 313 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 Q8TCH9 128 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 S100ZQ8WXG8 99 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 FOXRED1Q96CU9 486 aaPredicted RBP10.93□□□□□ -0.66
CCDC42-202ENST00000539522 MRI1Q9BV20 369 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 C6orf62Q9GZU0 229 aaPredicted RBP10.93□□□□□ -0.66
CCDC42-202ENST00000539522 SLC22A4Q9H015 551 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 METTL17Q9H7H0 456 aaPredicted RBP10.93□□□□□ -0.66
CCDC42-202ENST00000539522 BARX1Q9HBU1 254 aaPredicted RBP10.93□□□□□ -0.66
CCDC42-202ENST00000539522 DLL4Q9NR61 685 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 DECR2Q9NUI1 292 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 UFSP2Q9NUQ7 469 aa10.93□□□□□ -0.66
CCDC42-202ENST00000539522 TRAV8-7A0A075B6U6 113 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 A0A0G2JK05 382 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 ZNF732B4DXR9 585 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 TMEM178BH3BS89 294 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 RHBDL1O75783 438 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 ALX3O95076 343 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 CYB5R3P00387 301 aaPredicted RBP10.92□□□□□ -0.66
CCDC42-202ENST00000539522 LHBP01229 141 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 MAS1P04201 325 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 GRPP07492 148 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 ERCC1P07992 297 aaPredicted RBP10.92□□□□□ -0.66
CCDC42-202ENST00000539522 GPM6AP51674 278 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 PPP3R1P63098 170 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 SHEQ5VZ18 495 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 PLCXD3Q63HM9 321 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 GLT8D1Q68CQ7 371 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 SFXN4Q6P4A7 337 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 WDR82Q6UXN9 313 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 SPNS3Q6ZMD2 512 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 UTS2BQ765I0 119 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 NR2C2APQ86WQ0 139 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 LYPD6Q86Y78 171 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 CDH26Q8IXH8 852 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 GCSAMQ8N6F7 178 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 SCCPDHQ8NBX0 429 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 C19orf18Q8NEA5 215 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 NPRL2Q8WTW4 380 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 PP6455Q8WZ26 134 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 CCL17Q92583 94 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 SEH1LQ96EE3 360 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 RNF170Q96K19 258 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 NKX3-1Q99801 234 aaPredicted RBP10.92□□□□□ -0.66
CCDC42-202ENST00000539522 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 CHODLQ9H9P2 273 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 ABCB9Q9NP78 766 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 TMEM106BQ9NUM4 274 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 TAS2R4Q9NYW5 299 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 ABRACLQ9P1F3 81 aa10.92□□□□□ -0.66
CCDC42-202ENST00000539522 NOP16Q9Y3C1 178 aaKnown RBP10.92□□□□□ -0.66
CCDC42-202ENST00000539522 IGHV4-61A0A0C4DH41 118 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 SMIM30A4D0T7 59 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 ANXA2P2A6NMY6 339 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 IFITM5A6NNB3 132 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 CTDSP2O14595 271 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 CDIPTO14735 213 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 FCN3O75636 299 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 ZNF205O95201 554 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 ADRA2CP18825 462 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 ATF1P18846 271 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 RAB3AP20336 220 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 IL2RGP31785 369 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 NR4A2P43354 598 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 SRP9P49458 86 aaKnown RBP10.91□□□□□ -0.66
CCDC42-202ENST00000539522 OR10A3P58181 314 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 ZNF181Q2M3W8 571 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 AVPI1Q5T686 147 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 MAPK1IP1LQ8NDC0 245 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 OR5A2Q8NGI9 324 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 OR13C9Q8NGT0 318 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 TRMT10AQ8TBZ6 339 aaKnown RBP10.91□□□□□ -0.66
CCDC42-202ENST00000539522 FAM168AQ92567 244 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 SPACA5Q96QH8 159 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 EGLN1Q9GZT9 426 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 SMURF1Q9HCE7 757 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 TMEM138Q9NPI0 162 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 C1orf123Q9NWV4 160 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 DAPK2Q9UIK4 370 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 PPP1R3CQ9UQK1 317 aa10.91□□□□□ -0.66
CCDC42-202ENST00000539522 F8VVB4 439 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 F8VWA3 439 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 AIPO00170 330 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 TNFRSF13BO14836 293 aaPredicted RBP10.9□□□□□ -0.66
CCDC42-202ENST00000539522 RGS5O15539 181 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 TPD52L2O43399 206 aaKnown RBP10.9□□□□□ -0.66
CCDC42-202ENST00000539522 SYNGR1O43759 233 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 IGHV2-70P01814 119 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 ALDOBP05062 364 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 TNFRSF1AP19438 455 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 TNFSF4P23510 183 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 AZGP1P25311 298 aaKnown RBP10.9□□□□□ -0.66
CCDC42-202ENST00000539522 BDKRB2P30411 391 aa10.9□□□□□ -0.66
CCDC42-202ENST00000539522 TNFSF8P32971 234 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms