RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ZNF12P17014 697 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 WNT4P56705 351 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 RPS11P62280 158 aaKnown RBP eCLIP13.11□□□□□ -0.31
RPAIN-206ENST00000539417 GLCCI1Q86VQ1 547 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 PP6455Q8WZ26 134 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 GHSRQ92847 366 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 RFT1Q96AA3 541 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 C10orf35Q96D05 121 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 SMIM19Q96E16 107 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 NEIL1Q96FI4 390 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-206ENST00000539417 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
RPAIN-206ENST00000539417 CDCA4Q9BXL8 241 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 MIOXQ9UGB7 285 aa13.11□□□□□ -0.31
RPAIN-206ENST00000539417 MYL12BO14950 172 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 GATBO75879 557 aaKnown RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 MPZP25189 248 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 PAX2Q02962 417 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 MED21Q13503 144 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 STUMQ69YW2 141 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 UTS2BQ765I0 119 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 FAM216BQ8N7L0 139 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TSEN15Q8WW01 171 aaKnown RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 MYDGFQ969H8 173 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 SSBP3Q9BWW4 388 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TMPRSS13Q9BYE2 586 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TRIM36Q9NQ86 728 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 SLC7A11Q9UPY5 501 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 DHDHQ9UQ10 334 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 A8MXK9 166 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 SERPINA3P01011 423 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 PGA5P0DJD9 388 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 GLRA1P23415 457 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 MAP2K4P45985 399 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 PITPNBP48739 271 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 FUT6P51993 359 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 ESCO2Q56NI9 601 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 WDR25Q64LD2 544 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 FAHD2BQ6P2I3 314 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 ZNF573Q86YE8 665 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 PARP16Q8N5Y8 322 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 POC1AQ8NBT0 407 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 OR8B3Q8NGG8 313 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 OR51A2Q8NGJ7 313 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 ANGPTL6Q8NI99 470 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 HAVCR2Q8TDQ0 301 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 SLAMF9Q96A28 289 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 DACT3Q96B18 629 aaPredicted RBP13.1□□□□□ -0.31
RPAIN-206ENST00000539417 FAHD2AQ96GK7 314 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 OR8B2Q96RD0 313 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TMEM160Q9NX00 188 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TAS2R4Q9NYW5 299 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 MTCH1Q9NZJ7 389 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 ERGIC3Q9Y282 383 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 ZNF281Q9Y2X9 895 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
RPAIN-206ENST00000539417 IGKV1D-17A0A075B6S4 117 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 C22orf46C9J442 243 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 DENRO43583 198 aaKnown RBP13.09□□□□□ -0.31
RPAIN-206ENST00000539417 FOXH1O75593 365 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 PSG2P11465 335 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-206ENST00000539417 CELP19835 753 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-206ENST00000539417 GNB2P62879 340 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 INSL4Q14641 139 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 MICBQ29980 383 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 ACP7Q6ZNF0 438 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 SLC25A26Q70HW3 274 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 ZNF671Q8TAW3 534 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 GPR148Q8TDV2 347 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 BORCS8Q96FH0 119 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 GAFA1Q96PS6 74 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 NRIP2Q9BQI9 281 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 NLKQ9UBE8 527 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 OPN4Q9UHM6 478 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 ZNF222Q9UK12 451 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 LRCH1Q9Y2L9 728 aa13.09□□□□□ -0.31
RPAIN-206ENST00000539417 POLR3KQ9Y2Y1 108 aaPredicted RBP13.09□□□□□ -0.31
RPAIN-206ENST00000539417 IGKV1-12A0A0C4DH73 117 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 TRBV5-5A0A0J9YX44 114 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 DVL1O14640 695 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 TMPRSS2O15393 492 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-206ENST00000539417 RGS10O43665 173 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 IGKV1D-12P01611 117 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 RPSAP08865 295 aaKnown RBP13.08□□□□□ -0.32
RPAIN-206ENST00000539417 CALCBP10092 127 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 NPBWR2P48146 333 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 RBP2P50120 134 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 MTCP1P56278 107 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 ERVK11-1P61568 191 aa13.08□□□□□ -0.32
RPAIN-206ENST00000539417 IL24Q13007 206 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms