RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 A0A1W2PRD5 423 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 A0A1W2PRF3 423 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 A0A1W2PRM7 423 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 CLPSL1A2RUU4 121 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 BTBD17A6NE02 478 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 CAPZA1P52907 286 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 BLMHQ13867 455 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 ACP7Q6ZNF0 438 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 C1orf122Q6ZSJ8 110 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 ZNF573Q86YE8 665 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 ZNRF1Q8ND25 227 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 METTL8Q9H825 291 aaKnown RBP18.2■□□□□ 0.5
SCARB1-206ENST00000539320 WARS2Q9UGM6 360 aaKnown RBP18.2■□□□□ 0.5
SCARB1-206ENST00000539320 POLDIP2Q9Y2S7 368 aa18.2■□□□□ 0.5
SCARB1-206ENST00000539320 A0A1B0GTI1 187 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 DHRS7CA6NNS2 312 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 DLGAP1O14490 977 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 KRT8P05787 483 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 PGA5P0DJD9 388 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 HAAOP46952 286 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 GDPGP1Q6ZNW5 385 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 SSX6Q7RTT6 188 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 FAM185AQ8N0U4 392 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 OR14K1Q8NGZ2 314 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 ZNF488Q96MN9 340 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 TBX5Q99593 518 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 GABARAPL3Q9BY60 117 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 RIBC2Q9H4K1 309 aa18.19■□□□□ 0.5
SCARB1-206ENST00000539320 SYNGR1O43759 233 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 RPP14O95059 124 aaKnown RBP18.18■□□□□ 0.5
SCARB1-206ENST00000539320 PAHP00439 452 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 CCL1P22362 96 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 HTR1FP30939 366 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 SAA4P35542 130 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 UBE2E1P51965 193 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 TAF9Q16594 264 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 TREML4Q6UXN2 200 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 Q6ZSR3 168 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 PNKDQ8N490 385 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 YIPF7Q8N8F6 280 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 VPREB3Q9UKI3 123 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCARB1-206ENST00000539320 OAZ3Q9UMX2 235 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 SLC22A13Q9Y226 551 aa18.18■□□□□ 0.5
SCARB1-206ENST00000539320 PQLC2LA1A4F0 135 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 RFPL4AA6NLU0 287 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 RFPL4AL1F8VTS6 287 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 CIB2O75838 187 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 APOL3O95236 402 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 BRICD5Q6PL45 260 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 ASRGL1Q7L266 308 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 CENPNQ96H22 339 aaPredicted RBP18.17■□□□□ 0.5
SCARB1-206ENST00000539320 PLEKHA1Q9HB21 404 aa18.17■□□□□ 0.5
SCARB1-206ENST00000539320 PKD1L1Q8TDX9 2849 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 MEIOCA2RUB1 952 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 H0YAE9 185 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 SLC1A7O00341 560 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 WIPF1O43516 503 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 NOS1APO75052 506 aaPredicted RBP18.16■□□□□ 0.5
SCARB1-206ENST00000539320 NXPH2O95156 264 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 OR2T7P0C7T2 308 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 POLR2IP36954 125 aaKnown RBP18.16■□□□□ 0.5
SCARB1-206ENST00000539320 SRSF4Q08170 494 aaKnown RBP18.16■□□□□ 0.5
SCARB1-206ENST00000539320 ACSM1Q08AH1 577 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 DHRS7BQ6IAN0 325 aaPredicted RBP18.16■□□□□ 0.5
SCARB1-206ENST00000539320 CATSPERDQ86XM0 798 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 CD177Q8N6Q3 437 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 OR10H4Q8NGA5 316 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 OR5D13Q8NGL4 314 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 OR8J1Q8NGP2 316 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 OR2T27Q8NH04 317 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 NRIP2Q9BQI9 281 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 C19orf12Q9NSK7 152 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 RNF114Q9Y508 228 aa18.16■□□□□ 0.5
SCARB1-206ENST00000539320 A0A1W2PQL4 384 aaPredicted RBP18.15■□□□□ 0.5
SCARB1-206ENST00000539320 ANKRD61A6NGH8 418 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 A6NIN4 97 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 SAC3D1A6NKF1 404 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 MPZP25189 248 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 ODF4Q2M2E3 257 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 ZNF561Q8N587 486 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 OR5R1Q8NH85 324 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 LINC01006Q8NI28 216 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 CITED1Q99966 193 aa18.15■□□□□ 0.5
SCARB1-206ENST00000539320 SF3B6Q9Y3B4 125 aaKnown RBP18.15■□□□□ 0.5
SCARB1-206ENST00000539320 METTL15A6NJ78 407 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 SYT7O43581 403 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 ANGPTL7O43827 346 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 PRDX2P32119 198 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 CEBPDP49716 269 aaPredicted RBP18.14■□□□□ 0.49
SCARB1-206ENST00000539320 TMED1Q13445 227 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 HCP5Q6MZN7 132 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 BATF2Q8N1L9 274 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 TRMT10AQ8TBZ6 339 aaKnown RBP18.14■□□□□ 0.49
SCARB1-206ENST00000539320 RBM4BQ9BQ04 359 aaKnown RBP18.14■□□□□ 0.49
SCARB1-206ENST00000539320 OSBPL10Q9BXB5 764 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 PKIBQ9C010 78 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 HES4Q9HCC6 221 aa18.14■□□□□ 0.49
SCARB1-206ENST00000539320 A0A1W2PPH5 198 aa18.13■□□□□ 0.49
SCARB1-206ENST00000539320 SULT1C4O75897 302 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms