RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 FKBP6O75344 327 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 SRSF10O75494 262 aaKnown RBP10.17□□□□□ -0.78
VAMP1-206ENST00000538970 DHRS3O75911 302 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 FAM107AO95990 144 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 TTRP02766 147 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 PGA5P0DJD9 388 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 CAPZA1P52907 286 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 CBX1P83916 185 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 SNAPC1Q16533 368 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 AANATQ16613 207 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 ZNF684Q5T5D7 378 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 TMEM42Q69YG0 159 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 ZNF561Q8N587 486 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 C11orf42Q8N5U0 333 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 OR4C13Q8NGP0 309 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 ASB17Q8WXJ9 295 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 PPP1R14AQ96A00 147 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 CNN2Q99439 309 aaKnown RBP10.17□□□□□ -0.78
VAMP1-206ENST00000538970 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 MEGF9Q9H1U4 602 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 RANBP3Q9H6Z4 567 aaPredicted RBP10.17□□□□□ -0.78
VAMP1-206ENST00000538970 MOB1AQ9H8S9 216 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 TVP23BQ9NYZ1 205 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 DNAJB9Q9UBS3 223 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 TMEM14AQ9Y6G1 99 aa10.17□□□□□ -0.78
VAMP1-206ENST00000538970 A0A1W2PPH5 198 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 MEGF11A6BM72 1044 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 J3QT63 122 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 SLC1A7O00341 560 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 GSC2O15499 205 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 NOS1APO75052 506 aaPredicted RBP10.16□□□□□ -0.78
VAMP1-206ENST00000538970 NRASP01111 189 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 PAX6P26367 422 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 PRDX2P32119 198 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 KIR2DS4P43632 304 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 HAAOP46952 286 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 CEBPDP49716 269 aaPredicted RBP10.16□□□□□ -0.78
VAMP1-206ENST00000538970 RIDAP52758 137 aaKnown RBP10.16□□□□□ -0.78
VAMP1-206ENST00000538970 CRISP1P54107 249 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 RPL31P62899 125 aaKnown RBP10.16□□□□□ -0.78
VAMP1-206ENST00000538970 FBLN7Q53RD9 439 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 TMEM200BQ69YZ2 307 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 C11orf88Q6PI97 169 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 Q6ZTK2 550 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 SPATA24Q86W54 205 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 DNAJC9Q8WXX5 260 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 CFHR4Q92496 578 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 NRIP2Q9BQI9 281 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 HES4Q9HCC6 221 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 RAB18Q9NP72 206 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 PAPOLBQ9NRJ5 636 aaKnown RBP10.16□□□□□ -0.78
VAMP1-206ENST00000538970 USE1Q9NZ43 259 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 IKZF2Q9UKS7 526 aa10.16□□□□□ -0.78
VAMP1-206ENST00000538970 PQLC2LA1A4F0 135 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 CHST1O43916 411 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 PRKYO43930 277 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 CCL3L1P16619 93 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 COX7A1P24310 79 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 MPZP25189 248 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 BMXP51813 675 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 FLOT2Q14254 428 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 ZNF273Q14593 569 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 CLVS2Q5SYC1 327 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 FAHD1Q6P587 224 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 ZNF322Q6U7Q0 402 aaPredicted RBP10.15□□□□□ -0.78
VAMP1-206ENST00000538970 LIAT1Q6ZQX7 453 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 ZNF573Q86YE8 665 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 KLHDC1Q8N7A1 406 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 OR4M1Q8NGD0 313 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 OR2T6Q8NHC8 308 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 PIFOQ8TCI5 191 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 HEXA-AS1Q9H8Q6 139 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 GPR173Q9NS66 373 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 GTF2A1LQ9UNN4 478 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 FOXJ3Q9UPW0 622 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 POLDIP2Q9Y2S7 368 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 V9GYS6 101 aa10.15□□□□□ -0.78
VAMP1-206ENST00000538970 A0A1B0GTI1 187 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 TCRBV3S1A0A5B6 114 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 LOC110117498-PIK3R3F6TDL0 507 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 M0R129 80 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 DLGAP1O14490 977 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 MAGEB4O15481 346 aaPredicted RBP10.14□□□□□ -0.79
VAMP1-206ENST00000538970 NXPH2O95156 264 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 TK1P04183 234 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 ERVFRD-1P60508 538 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 CXCR4P61073 352 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 PTGES3Q15185 160 aaKnown RBP10.14□□□□□ -0.79
VAMP1-206ENST00000538970 BCL2L15Q5TBC7 163 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 ZNF782Q6ZMW2 699 aaPredicted RBP10.14□□□□□ -0.79
VAMP1-206ENST00000538970 PLEKHG7Q6ZR37 379 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 Q6ZSR3 168 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 ASRGL1Q7L266 308 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 BCDIN3DQ7Z5W3 292 aaKnown RBP10.14□□□□□ -0.79
VAMP1-206ENST00000538970 SLC35F2Q8IXU6 374 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 ELMOD2Q8IZ81 293 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 BATF2Q8N1L9 274 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 C11orf44Q8N8P7 122 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 OR14K1Q8NGZ2 314 aa10.14□□□□□ -0.79
VAMP1-206ENST00000538970 OR2T27Q8NH04 317 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms