RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SLC25A26Q70HW3 274 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 WDR86Q86TI4 376 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 LYPD6Q86Y78 171 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 MUC15Q8N387 334 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 ZNF611Q8N823 705 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 SPERTQ8NA61 448 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 OR10K1Q8NGX5 313 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 TBC1D15Q8TC07 691 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 SLAMF9Q96A28 289 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 SLC25A28Q96A46 364 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 GAL3ST1Q99999 423 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 A3GALT2U3KPV4 340 aa12.02□□□□□ -0.49
CD4-208ENST00000538827 TMEM272A0A1B0GTI8 110 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 B9A039 149 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 HS3ST1O14792 307 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 IGHV1-46P01743 117 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 UBBP0CG47 229 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 CFPP27918 469 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 RANBP1P43487 201 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 TNFAIP6P98066 277 aaPredicted RBP12.01□□□□□ -0.49
CD4-208ENST00000538827 ZNF154Q13106 437 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 RSU1Q15404 277 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 EFNB3Q15768 340 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 SLC22A6Q4U2R8 563 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 UBE2NLQ5JXB2 153 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 OR10K2Q6IF99 312 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 FAM166AQ6J272 317 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 CRIP3Q6Q6R5 217 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 ZNF573Q86YE8 665 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 CALHM1Q8IU99 346 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 OR6Q1Q8NGQ2 317 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 ITLN1Q8WWA0 313 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 FAM46BQ96A09 425 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 MRI1Q9BV20 369 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 METTL9Q9H1A3 318 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 UFSP2Q9NUQ7 469 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 ETV7Q9Y603 341 aa12.01□□□□□ -0.49
CD4-208ENST00000538827 CHD3Q12873 2000 aaKnown RBP12.01□□□□□ -0.49
CD4-208ENST00000538827 hCG_1807616A0A1W2PRN6 198 aa12□□□□□ -0.49
CD4-208ENST00000538827 SYNGR1O43759 233 aa12□□□□□ -0.49
CD4-208ENST00000538827 TMEM127O75204 238 aa12□□□□□ -0.49
CD4-208ENST00000538827 CRTAPO75718 401 aaPredicted RBP12□□□□□ -0.49
CD4-208ENST00000538827 GOSR1O95249 250 aa12□□□□□ -0.49
CD4-208ENST00000538827 HTR3BO95264 441 aa12□□□□□ -0.49
CD4-208ENST00000538827 MPIG6BO95866 241 aa12□□□□□ -0.49
CD4-208ENST00000538827 EIF4EP06730 217 aaKnown RBP12□□□□□ -0.49
CD4-208ENST00000538827 CD200P41217 278 aa12□□□□□ -0.49
CD4-208ENST00000538827 SRP9P49458 86 aaKnown RBP12□□□□□ -0.49
CD4-208ENST00000538827 EVX1P49640 407 aa12□□□□□ -0.49
CD4-208ENST00000538827 CAPZA1P52907 286 aa12□□□□□ -0.49
CD4-208ENST00000538827 PLA2G7Q13093 441 aa12□□□□□ -0.49
CD4-208ENST00000538827 PDZK1IP1Q13113 114 aa12□□□□□ -0.49
CD4-208ENST00000538827 DYNC1I2Q13409 638 aaKnown RBP12□□□□□ -0.49
CD4-208ENST00000538827 C2orf76Q3KRA6 126 aa12□□□□□ -0.49
CD4-208ENST00000538827 ACBD4Q8NC06 268 aa12□□□□□ -0.49
CD4-208ENST00000538827 MEGF10Q96KG7 1140 aa12□□□□□ -0.49
CD4-208ENST00000538827 OR2V2Q96R30 315 aa12□□□□□ -0.49
CD4-208ENST00000538827 MIXL1Q9H2W2 232 aa12□□□□□ -0.49
CD4-208ENST00000538827 OR51I2Q9H344 312 aa12□□□□□ -0.49
CD4-208ENST00000538827 BANF2Q9H503 90 aa12□□□□□ -0.49
CD4-208ENST00000538827 FAIMQ9NVQ4 179 aa12□□□□□ -0.49
CD4-208ENST00000538827 ZDHHC8Q9ULC8 765 aa12□□□□□ -0.49
CD4-208ENST00000538827 PKDREJQ9NTG1 2253 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 DCHS2Q6V1P9 2916 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 A0A1W2PP11 408 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 A0A1W2PPR1 153 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 CSTBP04080 98 aaKnown RBP11.99□□□□□ -0.49
CD4-208ENST00000538827 VSIG8P0DPA2 414 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
CD4-208ENST00000538827 BCL3P20749 454 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 SNU13P55769 128 aaKnown RBP11.99□□□□□ -0.49
CD4-208ENST00000538827 SCAND1P57086 179 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 GMFBP60983 142 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 MAB21L1Q13394 359 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 AGAP6Q5VW22 663 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 C1QL2Q7Z5L3 287 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 TMEM200AQ86VY9 491 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 MKXQ8IYA7 352 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 DTX3Q8N9I9 347 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 SCCPDHQ8NBX0 429 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 OR51F2Q8NH61 342 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 SLC25A38Q96DW6 304 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 ZNF488Q96MN9 340 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 TMEM59Q9BXS4 323 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 PKIBQ9C010 78 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 CST11Q9H112 138 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 C1orf123Q9NWV4 160 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 RHBDL2Q9NX52 303 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 EXTL2Q9UBQ6 330 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 POLDIP2Q9Y2S7 368 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 RAI1Q7Z5J4 1906 aaPredicted RBP11.99□□□□□ -0.49
CD4-208ENST00000538827 ROS1P08922 2347 aa11.99□□□□□ -0.49
CD4-208ENST00000538827 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 A0A1B0GWJ7 208 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 CDIPTO14735 213 aa11.98□□□□□ -0.49
CD4-208ENST00000538827 KDM4BO94953 1096 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms