RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 H7BYZ3 331 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 CLEC3AO75596 197 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 SCGB1D2O95969 90 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 SFTPDP35247 375 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 HNRNPA3P51991 378 aaKnown RBP10.96□□□□□ -0.65
USP3-203ENST00000538686 GNB2P62879 340 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 RHOGP84095 191 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 NFATC4Q14934 902 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 ASPHD2Q6ICH7 369 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 IL22RA1Q8N6P7 574 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 ZFP62Q8NB50 900 aaPredicted RBP10.96□□□□□ -0.65
USP3-203ENST00000538686 NKD1Q969G9 470 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 ANAPC16Q96DE5 110 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 SDF2Q99470 211 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 SOHLH2Q9NX45 425 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 CGGBP1Q9UFW8 167 aaPredicted RBP10.96□□□□□ -0.65
USP3-203ENST00000538686 PADI3Q9ULW8 664 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 ZNF780BQ9Y6R6 833 aa10.96□□□□□ -0.65
USP3-203ENST00000538686 TICRRQ7Z2Z1 1910 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 ZNF732B4DXR9 585 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 PITX3O75364 302 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 TUBG1P23258 451 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 ATP6V0CP27449 155 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 ACAA2P42765 397 aaKnown RBP10.96□□□□□ -0.66
USP3-203ENST00000538686 DNASE1L1P49184 302 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 UCP3P55916 312 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 SNRPD1P62314 119 aaKnown RBP10.96□□□□□ -0.66
USP3-203ENST00000538686 MRPL49Q13405 166 aaKnown RBP10.96□□□□□ -0.66
USP3-203ENST00000538686 NSDHLQ15738 373 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 LDLRAD2Q5SZI1 272 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 FCRL6Q6DN72 434 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 SLC48A1Q6P1K1 146 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 C16orf82Q7Z2V1 217 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 OR4D5Q8NGN0 318 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 DDIT4LQ96D03 193 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 ABHD6Q9BV23 337 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 TBX21Q9UL17 535 aa10.96□□□□□ -0.66
USP3-203ENST00000538686 WIPF3A6NGB9 483 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 M0QZ24 198 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 FGF17O60258 216 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 HOXB2P14652 356 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 CDC34P49427 236 aaPredicted RBP10.95□□□□□ -0.66
USP3-203ENST00000538686 CLDN2P57739 230 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 C9orf50Q5SZB4 431 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 AGBL4Q5VU57 503 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 RTL6Q6ICC9 239 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 SLC8B1Q6J4K2 584 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 LCN10Q6JVE6 187 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 CNKSR3Q6P9H4 555 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 KCNIP4Q6PIL6 250 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 LILRA3Q8N6C8 439 aaPredicted RBP10.95□□□□□ -0.66
USP3-203ENST00000538686 SLC16A11Q8NCK7 471 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 CMTM2Q8TAZ6 248 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 ALG14Q96F25 216 aa10.95□□□□□ -0.66
USP3-203ENST00000538686 SLC25A44Q96H78 314 aaPredicted RBP10.95□□□□□ -0.66
USP3-203ENST00000538686 MRPS16Q9Y3D3 137 aaKnown RBP10.95□□□□□ -0.66
USP3-203ENST00000538686 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 A0A1B0GWA3 101 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 MED19A0JLT2 244 aaPredicted RBP10.94□□□□□ -0.66
USP3-203ENST00000538686 DCDC2BA2VCK2 349 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 TBL1XO60907 577 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 TIAF1O95411 115 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 BCL2P10415 239 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 S100A7P31151 101 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 MPLP40238 635 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 POLR2LP62875 67 aaKnown RBP10.94□□□□□ -0.66
USP3-203ENST00000538686 BTN3A2P78410 334 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 NHLH1Q02575 133 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 MPV17LQ2QL34 196 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 LRRC73Q5JTD7 316 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 FAM78AQ5JUQ0 283 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 PRR27Q6MZM9 219 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 PRSS57Q6UWY2 283 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 SLC24A5Q71RS6 500 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 NPAS4Q8IUM7 802 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 KLHDC1Q8N7A1 406 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 LINC01555Q8NAE3 123 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 SLC38A9Q8NBW4 561 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 OR5L1Q8NGL2 311 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 OR6N2Q8NGY6 317 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 OR2AJ1Q8NGZ0 328 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 OR2T10Q8NGZ9 312 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 GPR146Q96CH1 333 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 ZDHHC6Q9H6R6 413 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 B4GALT6Q9UBX8 382 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 MRPS23Q9Y3D9 190 aaKnown RBP10.94□□□□□ -0.66
USP3-203ENST00000538686 ST8SIA3O43173 380 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 STC2O76061 302 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 OR6A2O95222 327 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 KLKB1P03952 638 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 CKMP06732 381 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 ACRP10323 421 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 ESDP10768 282 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 GNB3P16520 340 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 PI3P19957 117 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 MSR1P21757 451 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 GLRA1P23415 457 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
USP3-203ENST00000538686 RAB38P57729 211 aa10.94□□□□□ -0.66
USP3-203ENST00000538686 FOXK1P85037 733 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms