RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 LYVE1Q9Y5Y7 322 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 TNFRSF11BO00300 401 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 SYNGR1O43759 233 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 IFNGP01579 166 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 ALDOBP05062 364 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF3P17036 446 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 CD83Q01151 205 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 BNIP1Q12981 228 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 SAMD4BQ5PRF9 694 aaKnown RBP11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 ACP7Q6ZNF0 438 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 BATF2Q8N1L9 274 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF561Q8N587 486 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF671Q8TAW3 534 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 MAGEL2Q9UJ55 1249 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 BAIAP2Q9UQB8 552 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 DSCAML1Q8TD84 2053 aa11.26□□□□□ -0.61
SMARCA4-206ENST00000538456 ODF3BA8MYP8 253 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 ARPC2O15144 300 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 CCNB2O95067 398 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 LYNP07948 512 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 PRDX2P32119 198 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 PPP1R8Q12972 351 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 DYNC1I2Q13409 638 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 CEACAM21Q3KPI0 293 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 KHDC1LQ5JSQ8 128 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 PLCXD3Q63HM9 321 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF770Q6IQ21 691 aaPredicted RBP11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 SHFQ7M4L6 423 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 COMMD2Q86X83 199 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 THEM6Q8WUY1 208 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 MALSU1Q96EH3 234 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 NSMCE2Q96MF7 247 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 RASL12Q9NYN1 266 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 OR14J1Q9UGF5 321 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 TBL2Q9Y4P3 447 aaKnown RBP11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 HILPDAQ9Y5L2 63 aa11.25□□□□□ -0.61
SMARCA4-206ENST00000538456 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 SELENOFO60613 162 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 ATP5HO75947 161 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 KRT36O76013 467 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 MAP2K3P46734 347 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 OR12D2P58182 307 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 TCTEX1D4Q5JR98 221 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 MOB3CQ70IA8 216 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 IQCF1Q8N6M8 205 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 POC1AQ8NBT0 407 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 OR13D1Q8NGV5 346 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 OTOSQ8NHW6 89 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 CMTM5Q96DZ9 223 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 OR51V1Q9H2C8 321 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 NIPAL2Q9H841 368 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 CMC2Q9NRP2 79 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 KLHDC2Q9Y2U9 406 aa11.24□□□□□ -0.61
SMARCA4-206ENST00000538456 OR5B21A6NL26 309 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 C17orf98A8MV24 154 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 NXPH2O95156 264 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 TK1P04183 234 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 HMGA2P52926 109 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 DLX6P56179 175 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 SLC34A1Q06495 639 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF626Q68DY1 528 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 OR5A2Q8NGI9 324 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 MYDGFQ969H8 173 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 INPP5EQ9NRR6 644 aa11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
SMARCA4-206ENST00000538456 E9PQ18 207 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 DUS4LO95620 317 aaKnown RBP11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 CLIC3O95833 236 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 PGA5P0DJD9 388 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 HSD17B1P14061 328 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 CALB2P22676 271 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 PRDX6P30041 224 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 HAAOP46952 286 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 EDDM3BP56851 147 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 LCN8Q6JVE9 175 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 C10orf99Q6UWK7 81 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 CALHM1Q8IU99 346 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF454Q8N9F8 522 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 ASCC1Q8N9N2 400 aaKnown RBP11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 OR11H6Q8NGC7 330 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 NSL1Q96IY1 281 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 OR8B4Q96RC9 309 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 ARL8BQ9NVJ2 186 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 PIGLQ9Y2B2 252 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 U3KQV3 271 aa11.22□□□□□ -0.61
SMARCA4-206ENST00000538456 J3QT63 122 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 PSMD9O00233 223 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF728P0DKX0 622 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 T-ENOLP0DO92 83 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 IGHV1-8P0DP01 117 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 RASSF2P50749 326 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 DYNLT3P51808 116 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.61
SMARCA4-206ENST00000538456 ZNF684Q5T5D7 378 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms