RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 SNX13Q9Y5W8 968 aa4.32□□□□□ -1.72
SNHG1-207ENST00000537965 LOC100653049A0A140TA62 436 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 A0A1W2PRD5 423 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 A0A1W2PRF3 423 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 A0A1W2PRM7 423 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF785A8K8V0 405 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 HMGB1P1B2RPK0 211 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF878C9JN71 531 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 E9PQ18 207 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 FXYD1O00168 92 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ACOT8O14734 319 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 CDIPTO14735 213 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SIGLEC5O15389 551 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ANGPTL7O43827 346 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 EDF1O60869 148 aaKnown RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 PROP1O75360 226 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 KRT34O76011 436 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SERPINA1P01009 418 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ACAA1P09110 424 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 NDUFB7P17568 137 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 HSD11B1P28845 292 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 FMO3P31513 532 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SLC35A2P78381 396 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 KLRD1Q13241 179 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 LY6EQ16553 131 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 DEFB121Q5J5C9 76 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 GLYATL3Q5SZD4 288 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 STUMQ69YW2 141 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 WDR82Q6UXN9 313 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF788Q6ZQV5 615 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SLC16A9Q7RTY1 509 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 DCXRQ7Z4W1 244 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ZDHHC21Q8IVQ6 265 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 C11orf53Q8IXP5 236 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 Q8N2B8 174 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 FAM216BQ8N7L0 139 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 C11orf44Q8N8P7 122 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 WFDC9Q8NEX5 89 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 PROKR2Q8NFJ6 384 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 OR5T2Q8NGG2 359 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 OR4K13Q8NH42 304 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 OR2AE1Q8NHA4 323 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 OR5K1Q8NHB7 308 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 RP9Q8TA86 221 aaKnown RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF671Q8TAW3 534 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 RPS4Y2Q8TD47 263 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 DPF1Q92782 380 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 DUS3LQ96G46 650 aaKnown RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 RAB3IPQ96QF0 476 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 HIST1H2AAQ96QV6 131 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 NKX3-1Q99801 234 aaPredicted RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 PAPOLGQ9BWT3 736 aaKnown RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 TLNRD1Q9H1K6 362 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SEMA6AQ9H2E6 1030 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 OR52D1Q9H346 318 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ABCB10Q9NRK6 738 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 CENPMQ9NSP4 180 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF391Q9UJN7 358 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SAMD4AQ9UPU9 718 aaKnown RBP4.31□□□□□ -1.72
SNHG1-207ENST00000537965 SIGLEC9Q9Y336 463 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 LRP12Q9Y561 859 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 N6AMT1Q9Y5N5 214 aa4.31□□□□□ -1.72
SNHG1-207ENST00000537965 OR6C68A6NDL8 312 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 OR2AT4A6NND4 320 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 VGLL3A8MV65 326 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 F5H697 171 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 ZNF593O00488 134 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 TRIAP1O43715 76 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 FCN3O75636 299 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 GADD45GO95257 159 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 ANXA2P07355 339 aaKnown RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 GLRA1P23415 457 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 GABRA2P47869 451 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 ENTPD1P49961 510 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 PRKXP51817 358 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 FXYD6P3P58550 94 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 FAM3AP98173 230 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 LIPEQ05469 1076 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 CNN3Q15417 329 aaKnown RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 C4orf46Q504U0 113 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 KLHL22Q53GT1 634 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 TEX30Q5JUR7 227 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 SHFQ7M4L6 423 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 CALHM1Q8IU99 346 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.3□□□□□ -1.72
SNHG1-207ENST00000537965 SLC15A3Q8IY34 581 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 TIGD4Q8IY51 512 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 LINC00471Q8N535 108 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 SDR9C7Q8NEX9 313 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 ANGPTL6Q8NI99 470 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 GNPDA2Q8TDQ7 276 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 MCUR1Q96AQ8 359 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 SLAMF6Q96DU3 332 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 MALSU1Q96EH3 234 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 REEP6Q96HR9 211 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 AKR1E2Q96JD6 320 aa4.3□□□□□ -1.72
SNHG1-207ENST00000537965 RNF170Q96K19 258 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms