RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CRYBG3Q68DQ2 2970 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 CLDN25C9JDP6 229 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 CDIPTO14735 213 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 CD200P41217 278 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 NPBWR2P48146 333 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 QRFPP83859 136 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 FAM76BQ5HYJ3 339 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 DTX3Q8N9I9 347 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 PNLDC1Q8NA58 520 aaKnown RBP13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 TMEM104Q8NE00 496 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 AQP3Q92482 292 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 CYYR1Q96J86 154 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 PLEKHF2Q9H8W4 249 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 ELL3Q9HB65 397 aaPredicted RBP13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 HMG20AQ9NP66 347 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 ABCB9Q9NP78 766 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 CYSLTR2Q9NS75 346 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 FAIMQ9NVQ4 179 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 LAMP3Q9UQV4 416 aa13.25□□□□□ -0.29
SFSWAP-206ENST00000537582 TMEM272A0A1B0GTI8 110 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 LRP5LA4QPB2 252 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 A6NLC8 198 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SFTPBP07988 381 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 VSIG8P0DPA2 414 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 ARSBP15848 533 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 PMELP40967 661 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 GMFBP60983 142 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SNRPD2P62316 118 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 UNC119Q13432 240 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 RIN1Q13671 783 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SLC22A6Q4U2R8 563 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SAMD12Q8N8I0 201 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 AP3S1Q92572 193 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SLC25A38Q96DW6 304 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 BANF2Q9H503 90 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 CBLN4Q9NTU7 201 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 DCAF16Q9NXF7 216 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 MTCH1Q9NZJ7 389 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 ZDHHC8Q9ULC8 765 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 CACNG2Q9Y698 323 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 A3GALT2U3KPV4 340 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 RAI1Q7Z5J4 1906 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 FBN2P35556 2912 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 A0A075B6Q4 140 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 J3QT63 122 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 LDLRAD4O15165 306 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 RGS5O15539 181 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 EIF4EP06730 217 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 BCL3P20749 454 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SERPINA2P20848 420 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 TLE4Q04727 773 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 DTX2Q86UW9 622 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 MOGAT3Q86VF5 341 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 TMEM200AQ86VY9 491 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF573Q86YE8 665 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 SPERTQ8NA61 448 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 OR6Q1Q8NGQ2 317 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 OR51F2Q8NH61 342 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 KCTD12Q96CX2 325 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 VRK1Q99986 396 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 TRAF4Q9BUZ4 470 aaPredicted RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 TLNRD1Q9H1K6 362 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 C14orf119Q9NWQ9 140 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 C1orf123Q9NWV4 160 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 NKIRAS2Q9NYR9 191 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 ZNF581Q9P0T4 197 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 ABRACLQ9P1F3 81 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 IL36RNQ9UBH0 155 aa13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 NOP16Q9Y3C1 178 aaKnown RBP13.24□□□□□ -0.29
SFSWAP-206ENST00000537582 CACNA1DQ01668 2161 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 DOPEY2Q9Y3R5 2298 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 PTBP3O95758 552 aaKnown RBP13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 BPNT1O95861 308 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 ADH4P08319 380 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 MPZP25189 248 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 AGAP6Q5VW22 663 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 C16orf87Q6PH81 154 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 ASCL4Q6XD76 172 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 RTN4RL2Q86UN3 420 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 CHPT1Q8WUD6 406 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 NRGNQ92686 78 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 SEH1LQ96EE3 360 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 CACNG6Q9BXT2 260 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 MMP27Q9H306 513 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 RBFOX1Q9NWB1 397 aaKnown RBP13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 SPATA2Q9UM82 520 aa13.23□□□□□ -0.29
SFSWAP-206ENST00000537582 ARFGEF3Q5TH69 2177 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 TMEM14DPA8MWL7 114 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 WNT9BO14905 357 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 TPD52L2O43399 206 aaKnown RBP13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 AKR7A2O43488 359 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 LY6HO94772 140 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 GOSR1O95249 250 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 HTR3BO95264 441 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 HPXP02790 462 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 CD55P08174 381 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 ELK1P19419 428 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 CDKN1AP38936 164 aa13.22□□□□□ -0.29
SFSWAP-206ENST00000537582 IL24Q13007 206 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms