RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TUSC2O75896 110 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 EDN3P14138 238 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RAC1P63000 192 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SCGB2A2Q13296 93 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SLC17A1Q14916 467 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SP6Q3SY56 376 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SLC26A10Q8NG04 563 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 PIGCQ92535 297 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 LANCL2Q9NS86 450 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SLC35D1Q9NTN3 355 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FBLN5Q9UBX5 448 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 HDGFL3Q9Y3E1 203 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ENTPD2Q9Y5L3 495 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TMED7-TICAM2A0A0A6YYA0 188 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TGIF2-C20orf24A0A0A6YYL0 155 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FAM24AA6NFZ4 105 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TOX4O94842 621 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 DANCRP0C864 163 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 PIGPP57054 158 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RPS21P63220 83 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ELAVL3Q14576 367 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 PDLIM3Q53GG5 364 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 Q6ZN92 141 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 DEFB119Q8N690 84 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 DAZLQ92904 295 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 VN1R1Q9GZP7 353 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CBLN4Q9NTU7 201 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 DOCK6Q96HP0 2047 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RPP30P78346 268 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ENDOGQ14249 297 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 WDR5BQ86VZ2 330 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RTN4IP1Q8WWV3 396 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 WBP2Q969T9 261 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 GPA33Q99795 319 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 LAT2Q9GZY6 243 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CRISPLD2Q9H0B8 497 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 DUSP15Q9H1R2 295 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 OPN3Q9H1Y3 402 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 OR51B6Q9H340 312 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM9BQ9NQ34 198 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 PIGLQ9Y2B2 252 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TRBV5-7A0A0A0MS05 114 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TOX3O15405 576 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 IL33O95760 270 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FGF8P55075 233 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RPS20P60866 119 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 FAM174AQ8TBP5 190 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ADGRG7Q96K78 797 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 MYOTQ9UBF9 498 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 H3BP45 60 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 IGHG1P01857 330 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 OPRM1P35372 400 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 VIPR2P41587 438 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CSNK1A1P48729 337 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RPL27P61353 136 aaKnown RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 NTHL1P78549 312 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 RAB31Q13636 194 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 GAMTQ14353 236 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 AGBL4Q5VU57 503 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CLEC18BQ6UXF7 455 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SLC25A26Q70HW3 274 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM156Q8N614 296 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 KLHDC1Q8N7A1 406 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 CMTM2Q8TAZ6 248 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 ARRDC3Q96B67 414 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 SEH1LQ96EE3 360 aa4.82□□□□□ -1.64
PTPRD-213ENST00000537002 GPX7Q96SL4 187 aaPredicted RBP4.82□□□□□ -1.64
PTPRD-213ENST00000537002 COX5BP10606 129 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 KHDC3LQ587J8 217 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 WDR38Q5JTN6 314 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 DCAF10Q5QP82 559 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 FAM78BQ5VT40 261 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SLC35G3Q8N808 338 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 H0YGG7 62 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PRKNO60260 465 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 OR2J2O76002 312 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 MBPP02686 304 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TRGC2P03986 189 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 KIR3DL2P43630 455 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 GABRA2P47869 451 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 BLKP51451 505 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 MMP16P51512 607 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 EFNB2P52799 333 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SLC37A1P57057 533 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RPL18Q07020 188 aaKnown RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 NSDHLQ15738 373 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ACSF3Q4G176 576 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ADAD2Q8NCV1 583 aaKnown RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ADAMTS18Q8TE60 1221 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 CNRIP1Q96F85 164 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 IMMP2LQ96T52 175 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 FUT9Q9Y231 359 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 METTL12A8MUP2 240 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 K7ESM1 405 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 BMP5P22003 454 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 OR10J1P30954 320 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms