RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 GABRA6Q16445 453 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 MYPOPQ86VE0 399 aaPredicted RBP19.55■□□□□ 0.72
HMGA2-206ENST00000536545 CALHM1Q8IU99 346 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 ZDHHC23Q8IYP9 409 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 C9orf62Q8N4C0 152 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 ZSCAN4Q8NAM6 433 aaPredicted RBP19.55■□□□□ 0.72
HMGA2-206ENST00000536545 TMEM246Q9BRR3 403 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 DKK4Q9UBT3 224 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 SSUH2Q9Y2M2 353 aa19.55■□□□□ 0.72
HMGA2-206ENST00000536545 CD300LBA8K4G0 201 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 G3V3Q6 166 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 K7EM74 188 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 AKR7A2O43488 359 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 SPINK2P20155 84 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 FOXC1Q12948 553 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 C6orf201Q7Z4U5 140 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 ZDHHC22Q8N966 263 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 ZNF431Q8TF32 576 aaPredicted RBP19.54■□□□□ 0.72
HMGA2-206ENST00000536545 MRPS24Q96EL2 167 aaKnown RBP19.54■□□□□ 0.72
HMGA2-206ENST00000536545 PIPOXQ9P0Z9 390 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 HSF4Q9ULV5 492 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 LHX6Q9UPM6 363 aa19.54■□□□□ 0.72
HMGA2-206ENST00000536545 OR2AT4A6NND4 320 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 J3QW42 95 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 TPOP07202 933 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 SFTPBP07988 381 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 CELA3BP08861 270 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 OR4E1P0C645 316 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 UBE2NP61088 152 aaKnown RBP19.53■□□□□ 0.72
HMGA2-206ENST00000536545 TAF9Q16594 264 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 TBC1D28Q2M2D7 210 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 C4orf46Q504U0 113 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 TMED4Q7Z7H5 227 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 FTMTQ8N4E7 242 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 ZNF611Q8N823 705 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 OR11H4Q8NGC9 324 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 EMG1Q92979 244 aaKnown RBP19.53■□□□□ 0.72
HMGA2-206ENST00000536545 BOD1Q96IK1 185 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 ZNF581Q9P0T4 197 aa19.53■□□□□ 0.72
HMGA2-206ENST00000536545 ATP6V1G1O75348 118 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 GIPP09681 153 aaPredicted RBP19.52■□□□□ 0.72
HMGA2-206ENST00000536545 AMY2BP19961 511 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 CHATP28329 748 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 FOXF2Q12947 444 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 CEACAM21Q3KPI0 293 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 NKAPLQ5M9Q1 402 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 RPUSD3Q6P087 351 aaKnown RBP19.52■□□□□ 0.72
HMGA2-206ENST00000536545 NCCRP1Q6ZVX7 275 aaPredicted RBP19.52■□□□□ 0.72
HMGA2-206ENST00000536545 OSR2Q8N2R0 312 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 ARRDC1Q8N5I2 433 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 NAXEQ8NCW5 288 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 C1orf162Q8NEQ5 155 aaPredicted RBP19.52■□□□□ 0.72
HMGA2-206ENST00000536545 OR51F2Q8NH61 342 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 PLEKHJ1Q9NW61 149 aa19.52■□□□□ 0.72
HMGA2-206ENST00000536545 H3BUI4 141 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 OR2A4O95047 310 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 IFNA6P05013 189 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 PIGYQ3MUY2 71 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 ZNF585AQ6P3V2 769 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 C17orf107Q6ZR85 190 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 FBXL14Q8N1E6 418 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 ASCC1Q8N9N2 400 aaKnown RBP19.52■□□□□ 0.71
HMGA2-206ENST00000536545 Q8NFD4 153 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 OR2AK2Q8NG84 335 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 OR5L1Q8NGL2 311 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 OR2A7Q96R45 310 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 FN3KRPQ9HA64 309 aa19.52■□□□□ 0.71
HMGA2-206ENST00000536545 ZNF629Q9UEG4 869 aaPredicted RBP19.52■□□□□ 0.71
HMGA2-206ENST00000536545 MBD3L4A6NDZ8 208 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 MBD3L3A6NE82 208 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 MBD3L5A6NJ08 208 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 MSTNO14793 375 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 TNFSF13O75888 250 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 HOXB1P14653 301 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 SNU13P55769 128 aaKnown RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 TAS2R46P59540 309 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 UBE2MP61081 183 aaKnown RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 SEM1Q6ZVN7 128 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 SLC25A26Q70HW3 274 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 OR5H2Q8NGV7 314 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 OR2T35Q8NGX2 323 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 MBD3L2Q8NHZ7 208 aaPredicted RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 SLA2Q9H6Q3 261 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 MGAT4AQ9UM21 535 aa19.51■□□□□ 0.71
HMGA2-206ENST00000536545 SPENQ96T58 3664 aaKnown RBP19.51■□□□□ 0.71
HMGA2-206ENST00000536545 A0A1W2PR80 420 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 IDH3GP51553 393 aaPredicted RBP19.5■□□□□ 0.71
HMGA2-206ENST00000536545 RBM11P57052 281 aaKnown RBP19.5■□□□□ 0.71
HMGA2-206ENST00000536545 C2orf68Q2NKX9 166 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 INO80CQ6PI98 192 aaPredicted RBP19.5■□□□□ 0.71
HMGA2-206ENST00000536545 SLC25A42Q86VD7 318 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 SAXO1Q8IYX7 474 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 GPR137Q96N19 417 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 OR51B6Q9H340 312 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 PCDHB16Q9NRJ7 776 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 PLSCR4Q9NRQ2 329 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 ZNF230Q9UIE0 474 aaPredicted RBP19.5■□□□□ 0.71
HMGA2-206ENST00000536545 HSPB11Q9Y547 144 aa19.5■□□□□ 0.71
HMGA2-206ENST00000536545 GEMIN2O14893 280 aaKnown RBP19.49■□□□□ 0.71
HMGA2-206ENST00000536545 SMPD2O60906 423 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms