RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 ELL3Q9HB65 397 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF222Q9UK12 451 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 MAB21L2Q9Y586 359 aa11.77□□□□□ -0.53
UBE3B-206ENST00000536398 IGKV1-27A0A075B6S5 117 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ANKRD61A6NGH8 418 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 NKX6-3A6NJ46 265 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 DHRS7CA6NNS2 312 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 J3QT63 122 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 SIGLEC5O15389 551 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 INMTO95050 263 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 CLIC3O95833 236 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 CEBPDP49716 269 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ACTG1P63261 375 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ACTC1P68032 377 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ACTA1P68133 377 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 SMN1Q16637 294 aaKnown RBP11.76□□□□□ -0.53
UBE3B-206ENST00000536398 DEFB112Q30KQ8 113 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 LRRC10Q5BKY1 277 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 GPR157Q5UAW9 335 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 METTL11BQ5VVY1 283 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 RBMS3Q6XE24 437 aaKnown RBP11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ACP7Q6ZNF0 438 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 POC1AQ8NBT0 407 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 OR10AC1Q8NH08 325 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 H1FXQ92522 213 aaKnown RBP11.76□□□□□ -0.53
UBE3B-206ENST00000536398 LHX4Q969G2 390 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ADAT3Q96EY9 351 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-206ENST00000536398 PELI1Q96FA3 418 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 C4orf36Q96KX1 117 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF649Q9BS31 505 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 DCTN5Q9BTE1 182 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ADI1Q9BV57 179 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
UBE3B-206ENST00000536398 SLC25A10Q9UBX3 287 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-206ENST00000536398 RFPL4AA6NLU0 287 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 E9PI62 339 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 RFPL4AL1F8VTS6 287 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 F8VVB4 439 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 F8VWA3 439 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 WBP4O75554 376 aaKnown RBP11.75□□□□□ -0.53
UBE3B-206ENST00000536398 PGA5P0DJD9 388 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 NDUFB7P17568 137 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 IL13RA1P78552 427 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 SLC9A3R2Q15599 337 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 ZSCAN26Q16670 478 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 FDX2Q6P4F2 183 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 KCTD20Q7Z5Y7 419 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF573Q86YE8 665 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 Q8N7P7 452 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 MED30Q96HR3 178 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 NRIP2Q9BQI9 281 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 PLEKHA1Q9HB21 404 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 SMPD3Q9NY59 655 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-206ENST00000536398 RASL12Q9NYN1 266 aa11.75□□□□□ -0.53
UBE3B-206ENST00000536398 IGKV1-9A0A0C4DH69 117 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 SNTNA6NMZ2 147 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 MPZL2O60487 215 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 NOS1APO75052 506 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-206ENST00000536398 NXPH2O95156 264 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 HTR1AP08908 422 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 UBCP0CG48 685 aaKnown RBP11.74□□□□□ -0.53
UBE3B-206ENST00000536398 PRTN3P24158 256 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 MPZP25189 248 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 PEX2P28328 305 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 GALEQ14376 348 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 RCN1Q15293 331 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 C11orf91Q3C1V1 193 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 RNF144BQ7Z419 303 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 ZNF555Q8NEP9 628 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 OR51A4Q8NGJ6 313 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 GCDHQ92947 438 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-206ENST00000536398 FGGYQ96C11 551 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 Q96MT0 163 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 CHST5Q9GZS9 411 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 ERVK13-1Q9NX77 482 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 SLC7A11Q9UPY5 501 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 PCDHGB1Q9Y5G3 927 aa11.74□□□□□ -0.53
UBE3B-206ENST00000536398 IGHV1-69DA0A0B4J2H0 117 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 OR4C45A6NMZ5 311 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 IGHA1P01876 353 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 PRDX2P32119 198 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 ERVK11-1P61568 191 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 RAB40BQ12829 278 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 ALKBH1Q13686 389 aaKnown RBP11.73□□□□□ -0.53
UBE3B-206ENST00000536398 TMEM244Q5VVB8 128 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 C12orf54Q6X4T0 127 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 TMEM185AQ8NFB2 350 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 C8orf46Q8TAG6 207 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 CNIH3Q8TBE1 160 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 SLAMF9Q96A28 289 aa11.73□□□□□ -0.53
UBE3B-206ENST00000536398 HES4Q9HCC6 221 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms