RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 CCND3P30281 292 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 S100A7P31151 101 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 GABRA5P31644 462 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PTGER4P35408 488 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 APLNRP35414 380 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SNCAP37840 140 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SOX3P41225 446 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 RBM34P42696 430 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 RPL29P47914 159 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 BLKP51451 505 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 VAMP7P51809 220 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 POLR2HP52434 150 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 POLR2JP52435 117 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 ERVPABLB-1P60509 514 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CKS1BP61024 79 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CSNK2A1P68400 391 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 SLC35A1P78382 337 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 H3F3AP84243 136 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 EFNB1P98172 346 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PAX2Q02962 417 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 AKR1C1Q04828 323 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CACNG1Q06432 222 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PRDX4Q13162 271 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ITPK1Q13572 414 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CRMP1Q14194 572 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MEF2DQ14814 521 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TEAD2Q15562 447 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 NSDHLQ15738 373 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TCTN1Q2MV58 587 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TMEM249Q2WGJ8 235 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PLPPR5Q32ZL2 321 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 VWA2Q5GFL6 755 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 LDLRAD2Q5SZI1 272 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 DCST1Q5T197 706 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 GPR157Q5UAW9 335 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CARD17Q5XLA6 110 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PLCXD3Q63HM9 321 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 GLT8D1Q68CQ7 371 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR2T2Q6IF00 324 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ADNP2Q6IQ32 1131 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 DOK6Q6PKX4 331 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 APOOLQ6UXV4 268 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MBOAT2Q6ZWT7 520 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SLC25A26Q70HW3 274 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 MTSS1LQ765P7 747 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CHST9Q7L1S5 443 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 LRRC70Q7Z2Q7 622 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ADCK2Q7Z695 626 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 DEFB128Q7Z7B8 93 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CDC20BQ86Y33 519 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CALHM1Q8IU99 346 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ZDHHC21Q8IVQ6 265 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SIAH3Q8IW03 269 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FBXO16Q8IX29 292 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 GBGT1Q8N5D6 347 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 COLGALT1Q8NBJ5 622 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 RNF149Q8NC42 400 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CSNK2A3Q8NEV1 391 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 B3GNT7Q8NFL0 401 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 STEAP2Q8NFT2 490 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR2T12Q8NG77 320 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR11G2Q8NGC1 345 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR51L1Q8NGJ5 315 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR4A4PQ8NGN8 299 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR8J1Q8NGP2 316 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR13C5Q8NGS8 318 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR13C9Q8NGT0 318 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR52P1PQ8NH57 321 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 SLC7A13Q8TCU3 470 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 C15orf40Q8WUR7 153 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 THEM6Q8WUY1 208 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 EEF1AKMT1Q8WVE0 214 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 RNF133Q8WVZ7 376 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FAM151AQ8WW52 585 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 THAP4Q8WY91 577 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 BCL2L2Q92843 193 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 SMARCD2Q92925 531 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TMEM106AQ96A25 262 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FAM162AQ96A26 154 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 PINX1Q96BK5 328 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 MOB3AQ96BX8 217 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 NTNG2Q96CW9 530 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 HAVCR1Q96D42 359 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ACY3Q96HD9 319 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CPB2Q96IY4 423 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ITCHQ96J02 903 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 OR7D2Q96RA2 312 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 CITED1Q99966 193 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 NICN1Q9BSH3 213 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TPPP3Q9BW30 176 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FAIM2Q9BWQ8 316 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ZNF471Q9BX82 626 aaPredicted RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 POLR2J2Q9GZM3 115 aaKnown RBP2.14□□□□□ -2.07
SKA3-207ENST00000536239 ZBP1Q9H171 429 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 ATG5Q9H1Y0 275 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 VCX2Q9H322 139 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 TMEM185BQ9H7F4 350 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 AUNIPQ9H7T9 357 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 REEP1Q9H902 201 aa2.14□□□□□ -2.07
SKA3-207ENST00000536239 FN3KRPQ9HA64 309 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms