RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TP53TG5Q9Y2B4 290 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 HSPB11Q9Y547 144 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 TENM4Q6N022 2769 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 DNAJC13O75165 2243 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 NBPF19A0A087WUL8 3843 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 HELZ2Q9BYK8 2649 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 BAHCC1Q9P281 2608 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 KIAA1549Q9HCM3 1950 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PPIAL4EA0A075B759 164 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 IGHV5-10-1A0A0J9YXX1 117 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 GLYATL1P3A0A0U1RQE8 302 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 A0A1B0GVI7 797 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 A0A1W2PNV4 684 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RAB19A4D1S5 217 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 BTBD17A6NE02 478 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 OR51F1A6NGY5 319 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 FAM74A7A6NL05 159 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 WASHC1A8K0Z3 465 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SHISA9B4DS77 424 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 E5RI56 91 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 H7C2Y5 167 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CDC7O00311 574 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RGS5O15539 181 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PPIHO43447 177 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 TIMM8AO60220 97 aaPredicted RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 SRP72O76094 671 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 SLC25A14O95258 325 aaPredicted RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 HPP00738 406 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 IFNA10P01566 189 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 IGHV2-5P01817 119 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 MT-ND2P03891 347 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 KLK3P07288 261 aaPredicted RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 CRYGCP07315 174 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CSF3P09919 207 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SLC35G4P0C7Q5 338 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 OR56A5P0C7T3 313 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PPIAL4FP0DN26 164 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SLC2A1P11166 492 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 MLNP12872 115 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 IFI30P13284 250 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CTSEP14091 401 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CD36P16671 472 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 ZNF7P17097 686 aaPredicted RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 TPSB2P20231 275 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RAB4AP20338 218 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 NT5EP21589 574 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 GPX3P22352 226 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 LAP3P28838 519 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 TGM4P49221 684 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PRLHRP49683 370 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RGS6P49758 472 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SLC7A2P52569 658 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RAG2P55895 527 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 DNAJB13P59910 316 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SNRPD2P62316 118 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 SRYQ05066 204 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 STX4Q12846 297 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PON3Q15166 354 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 TPSAB1Q15661 275 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 FAM83EQ2M2I3 478 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CDNFQ49AH0 187 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 FAM74A3Q4VXF1 159 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 KLHL12Q53G59 568 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CDKL4Q5MAI5 379 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 GPRC6AQ5T6X5 926 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 GLYATQ6IB77 296 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 FRMPD2BQ6IN97 320 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 C3orf33Q6P1S2 294 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RNASEKQ6P5S7 137 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 FAM151BQ6UXP7 276 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 TMEM64Q6YI46 380 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 DPY19L2P2Q6ZN68 376 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RTL4Q6ZR62 310 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 TMUB2Q71RG4 321 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PGAP1Q75T13 922 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SNX20Q7Z614 316 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 RANBP3LQ86VV4 465 aaPredicted RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 ARRDC1Q8N5I2 433 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 MS4A15Q8N5U1 240 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 TTC29Q8NA56 475 aaPredicted RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 NANPQ8TBE9 248 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 LKAAEAR1Q8TD35 194 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SLC37A2Q8TED4 501 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PAQR8Q8TEZ7 354 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 SSC4DQ8WTU2 575 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 ASZ1Q8WWH4 475 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 PIGCQ92535 297 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 NAT6Q93015 286 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 UCN3Q969E3 161 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 POP5Q969H6 163 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 TM4SF18Q96CE8 201 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 BPIFA2Q96DR5 249 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 MRPS24Q96EL2 167 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 C14orf144Q96I85 54 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 CCDC115Q96NT0 180 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 KCNA7Q96RP8 456 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 NRTNQ99748 197 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 EBNA1BP2Q99848 306 aaKnown RBP2.68□□□□□ -1.98
USP48-215ENST00000534705 TIMM29Q9BSF4 260 aa2.68□□□□□ -1.98
USP48-215ENST00000534705 MRPL37Q9BZE1 423 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms