RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PCNX3Q9H6A9 2034 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 RP1P56715 2156 aa16.91■□□□□ 0.3
SMPD1-210ENST00000534405 MASP2O00187 686 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF708P17019 499 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 GALNSP34059 522 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 ZNF117Q03924 483 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 RAB30Q15771 203 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 C4orf17Q53FE4 359 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 LRRC69Q6ZNQ3 347 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 ULBP3Q9BZM4 244 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 PARD6AQ9NPB6 346 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 FOXD3Q9UJU5 478 aaPredicted RBP16.9■□□□□ 0.3
SMPD1-210ENST00000534405 H0YIG0 161 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 ALOX5APP20292 161 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 PAX5Q02548 391 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 RABEPKQ7Z6M1 372 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 C1orf87Q8N0U7 546 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 GVQW1Q8N7I0 195 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 OR4K15Q8NH41 348 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 ADIPOR1Q96A54 375 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 RARRES2Q99969 163 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 OR11A1Q9GZK7 315 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 SUSD2Q9UGT4 822 aa16.9■□□□□ 0.3
SMPD1-210ENST00000534405 LNP1A1A4G5 178 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 TRDCB7Z8K6 153 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 HSPA12AO43301 675 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 NUDT21O43809 227 aaKnown RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 OR4A8P0C604 315 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 TBPP20226 339 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 SOX8P57073 446 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 H3F3AP84243 136 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 SLC9A3R2Q15599 337 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 ZNF260Q3ZCT1 412 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 ASPHD2Q6ICH7 369 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 PLPP7Q8NBV4 271 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 CPEB3Q8NE35 698 aaKnown RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 OR51A2Q8NGJ7 313 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 C22orf15Q8WYQ4 148 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 FOXN4Q96NZ1 517 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 NKX3-1Q99801 234 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 METTL8Q9H825 291 aaKnown RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 MEMO1Q9Y316 297 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 KIR2DL5BA0A0G2JN68 375 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 KIR2DL5BA0A0G2JPC4 375 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 GEMIN2O14893 280 aaKnown RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 DDAH2O95865 285 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 IGKV3-11P04433 115 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 IFNA6P05013 189 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 ANKRD55Q3KP44 614 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 COA6Q5JTJ3 125 aaKnown RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 C1orf194Q5T5A4 169 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 TEX38Q6PEX7 206 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 C9orf40Q8IXQ3 194 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 KIR2DL5AQ8N109 375 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 OR13C3Q8NGS6 347 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 OR1P1Q8NH06 330 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 ZNF721Q8TF20 911 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 TSEN15Q8WW01 171 aaKnown RBP16.89■□□□□ 0.29
SMPD1-210ENST00000534405 RELTQ969Z4 430 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 C5orf34Q96MH7 638 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 SLC46A1Q96NT5 459 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 GINS3Q9BRX5 216 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 NUDT9Q9BW91 350 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.29
SMPD1-210ENST00000534405 LILRA5A6NI73 299 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 SLC22A6Q4U2R8 563 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 OR10A7Q8NGE5 316 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 TVP23CQ96ET8 276 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 DIRC2Q96SL1 478 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 SMIM3Q9BZL3 60 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 C5orf66Q9H5L9 145 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 CDH20Q9HBT6 801 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 LPAR2Q9HBW0 351 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 GPR132Q9UNW8 380 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 WIPF3A6NGB9 483 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 FRG2CA6NGY1 282 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 C11orf98E9PRG8 122 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 HCRTR2O43614 444 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 PGA3P0DJD8 388 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 FOLR1P15328 257 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 PPP1CCP36873 323 aaKnown RBP16.88■□□□□ 0.29
SMPD1-210ENST00000534405 DEFB133Q30KQ1 61 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 EMC4Q5J8M3 183 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 MARCH3Q86UD3 253 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 PTX4Q96A99 478 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 GSKIPQ9P0R6 139 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 DKKL1Q9UK85 242 aa16.88■□□□□ 0.29
SMPD1-210ENST00000534405 IGKV3D-11A0A0A0MRZ8 115 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 FTCDNL1E5RQL4 147 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 H0YL77 283 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 H3BMH7 237 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 ZNF217O75362 1048 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 BGLAPP02818 100 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 CCKBRP32239 447 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 IQCJQ1A5X6 159 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 GLYATL3Q5SZD4 288 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 AADACL3Q5VUY0 350 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 C4orf45Q96LM5 186 aa16.87■□□□□ 0.29
SMPD1-210ENST00000534405 DCBLD2Q96PD2 775 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms