RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 ORAI1Q96D31 301 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 NKX3-1Q99801 234 aaPredicted RBP11.13□□□□□ -0.63
CMTM1-219ENST00000533953 CHST5Q9GZS9 411 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 FKBP14Q9NWM8 211 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 CHCHD3Q9NX63 227 aaKnown RBP11.13□□□□□ -0.63
CMTM1-219ENST00000533953 CLN8Q9UBY8 286 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 SLC7A11Q9UPY5 501 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 LRCH1Q9Y2L9 728 aa11.13□□□□□ -0.63
CMTM1-219ENST00000533953 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 A8MXK9 166 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 J3QT63 122 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 SLC1A7O00341 560 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 OGG1O15527 345 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 RGS9O75916 674 aaPredicted RBP11.12□□□□□ -0.63
CMTM1-219ENST00000533953 SERPINA3P01011 423 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 FAM157CP0CG43 387 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 PIPP12273 146 aaPredicted RBP11.12□□□□□ -0.63
CMTM1-219ENST00000533953 ZNF12P17014 697 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 MYF6P23409 242 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 GABRA2P47869 451 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 TGM4P49221 684 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 CDK5R1Q15078 307 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 STUMQ69YW2 141 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 ZNF573Q86YE8 665 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 ZNF671Q8TAW3 534 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 ITFG2Q969R8 447 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 SLAMF9Q96A28 289 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 TMIGD2Q96BF3 282 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 CNBD2Q96M20 576 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 CNOT2Q9NZN8 540 aaKnown RBP11.12□□□□□ -0.63
CMTM1-219ENST00000533953 NLKQ9UBE8 527 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 LPAR3Q9UBY5 353 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 OR5V1Q9UGF6 321 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 RRP15Q9Y3B9 282 aaKnown RBP11.12□□□□□ -0.63
CMTM1-219ENST00000533953 INSIG2Q9Y5U4 225 aa11.12□□□□□ -0.63
CMTM1-219ENST00000533953 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 TMEM212A6NML5 194 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 OR2AT4A6NND4 320 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 CCDC159P0C7I6 412 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 PSG2P11465 335 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 MUC1P15941 1255 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 HNF1AP20823 631 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 AZGP1P25311 298 aaKnown RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 POU3F4P49335 361 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 FUT6P51993 359 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 MTCP1P56278 107 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 KCNJ8Q15842 424 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 RPL22L1Q6P5R6 122 aaKnown RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 ACP7Q6ZNF0 438 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 SLC25A26Q70HW3 274 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 POC1AQ8NBT0 407 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 OR52N1Q8NH53 320 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 TSEN15Q8WW01 171 aaKnown RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 ST8SIA4Q92187 359 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 DACT3Q96B18 629 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 BORCS8Q96FH0 119 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 MYCBPQ99417 103 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 NUDT16L1Q9BRJ7 211 aaKnown RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 ANKRD60Q9BZ19 345 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 COMMD4Q9H0A8 199 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 VCX3BQ9H321 246 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 ELL3Q9HB65 397 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 MTCH1Q9NZJ7 389 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
CMTM1-219ENST00000533953 POLR3KQ9Y2Y1 108 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 SOX21Q9Y651 276 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-219ENST00000533953 IGHV2-70DA0A0C4DH43 119 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 RFPL4AA6NLU0 287 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 RFPL4AL1F8VTS6 287 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 SPRY1O43609 319 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-219ENST00000533953 NDUFA2O43678 99 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 ANGPTL7O43827 346 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 GATBO75879 557 aaKnown RBP11.1□□□□□ -0.63
CMTM1-219ENST00000533953 CDK1P06493 297 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 RPSAP08865 295 aaKnown RBP11.1□□□□□ -0.63
CMTM1-219ENST00000533953 PGA5P0DJD9 388 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 NPBWR2P48146 333 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-219ENST00000533953 PAX8Q06710 450 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 MRPL28Q13084 256 aaKnown RBP11.1□□□□□ -0.63
CMTM1-219ENST00000533953 DGUOKQ16854 277 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 DMKNQ6E0U4 476 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-219ENST00000533953 CRIP3Q6Q6R5 217 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 ZNF788Q6ZQV5 615 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 BTN2A1Q7KYR7 527 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 EGFL6Q8IUX8 553 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 CD177Q8N6Q3 437 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 NANOGP1Q8N7R0 232 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 ZNRF1Q8ND25 227 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 OR51A2Q8NGJ7 313 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 RPS4Y2Q8TD47 263 aa11.1□□□□□ -0.63
CMTM1-219ENST00000533953 PP6455Q8WZ26 134 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms