RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SLC25A26Q70HW3 274 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 C1QL2Q7Z5L3 287 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 JAGN1Q8N5M9 183 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 OR5D18Q8NGL1 313 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 OR11L1Q8NGX0 322 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 TNFAIP8L1Q8WVP5 186 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 CCL17Q92583 94 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 ISOC1Q96CN7 298 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 FOXRED1Q96CU9 486 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-208ENST00000533643 CPNE2Q96FN4 548 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-208ENST00000533643 BCL7BQ9BQE9 202 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 UQCC2Q9BRT2 126 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 CNTD2Q9H8S5 307 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 BARX1Q9HBU1 254 aaPredicted RBP10.04□□□□□ -0.8
COMMD9-208ENST00000533643 DLL4Q9NR61 685 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 V9GY05 133 aa10.04□□□□□ -0.8
COMMD9-208ENST00000533643 ANKRD17O75179 2603 aaKnown RBP10.03□□□□□ -0.8
COMMD9-208ENST00000533643 IGKV1-12A0A0C4DH73 117 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 hCG_1807616A0A1W2PRN6 198 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 C3orf80F5H4A9 247 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 H3BMQ9 156 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 IFNL4K9M1U5 179 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 ANGPTL7O43827 346 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SSX4O60224 188 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 CYB5R3P00387 301 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-208ENST00000533643 LHBP01229 141 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 IL1AP01583 271 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 IGKV1D-12P01611 117 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 ACAA1P09110 424 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-208ENST00000533643 PGA5P0DJD9 388 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 TMEM225BP0DP42 221 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 RPS19P39019 145 aaKnown RBP10.03□□□□□ -0.8
COMMD9-208ENST00000533643 OR3A4PP47883 348 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SERPINB10P48595 397 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 PSMD7P51665 324 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 CAV3P56539 151 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 HOXA4Q00056 320 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-208ENST00000533643 IL24Q13007 206 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SPCS2Q15005 226 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 HFEQ30201 348 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 FAM166AQ6J272 317 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 ASCL4Q6XD76 172 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 MKXQ8IYA7 352 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SAXO1Q8IYX7 474 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 LRRC75A-AS1Q8N1F1 130 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 ZSCAN4Q8NAM6 433 aaPredicted RBP10.03□□□□□ -0.8
COMMD9-208ENST00000533643 OR4D6Q8NGJ1 314 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 OR10Z1Q8NGY1 313 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 OR51F2Q8NH61 342 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF671Q8TAW3 534 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 NDNFQ8TB73 568 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 LRRC29Q8WV35 223 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SLAMF9Q96A28 289 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SLC25A28Q96A46 364 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 TMEM106BQ9NUM4 274 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 MTCH1Q9NZJ7 389 aa10.03□□□□□ -0.8
COMMD9-208ENST00000533643 SMIM31A0A1B0GVY4 71 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 LRRC30A6NM36 301 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 NOTOA8MTQ0 251 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 F8VVB4 439 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 F8VWA3 439 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 SLC17A2O00624 439 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 WNT9BO14905 357 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 SLC22A1O15245 554 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 AKR7A2O43488 359 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 NOL3O60936 208 aaKnown RBP10.02□□□□□ -0.81
COMMD9-208ENST00000533643 NOS1APO75052 506 aaPredicted RBP10.02□□□□□ -0.81
COMMD9-208ENST00000533643 EGR1P18146 543 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 NPBWR2P48146 333 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 ERVK11-1P61568 191 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 RIN1Q13671 783 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 RAB11BQ15907 218 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 CARTPTQ16568 116 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 FAM201AQ5SY85 155 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 HES5Q5TA89 166 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 USP43Q70EL4 1123 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 GCSAMQ8N6F7 178 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 ZNF525Q8N782 197 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 BOLLQ8N9W6 283 aaKnown RBP10.02□□□□□ -0.81
COMMD9-208ENST00000533643 PNLDC1Q8NA58 520 aaKnown RBP10.02□□□□□ -0.81
COMMD9-208ENST00000533643 POC1AQ8NBT0 407 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 PXT1Q8NFP0 134 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 OR6M1Q8NGM8 313 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 HPS1Q92902 700 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 C12orf43Q96C57 262 aaKnown RBP10.02□□□□□ -0.81
COMMD9-208ENST00000533643 NRIP2Q9BQI9 281 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 FAM192AQ9GZU8 254 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 DCSTAMPQ9H295 470 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 PLGRKTQ9HBL7 147 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 NDUFA13Q9P0J0 144 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 ING4Q9UNL4 249 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 MRPS28Q9Y2Q9 187 aaKnown RBP10.02□□□□□ -0.81
COMMD9-208ENST00000533643 POLDIP2Q9Y2S7 368 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 CSMD2Q7Z408 3487 aa10.02□□□□□ -0.81
COMMD9-208ENST00000533643 MAP1AP78559 2803 aaPredicted RBP10.01□□□□□ -0.81
COMMD9-208ENST00000533643 CCDC160A6NGH7 325 aa10.01□□□□□ -0.81
COMMD9-208ENST00000533643 A6NHS1 94 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms