RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 SMIM21Q3B7S5 101 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 ACP7Q6ZNF0 438 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 ASRGL1Q7L266 308 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 LDLRAD3Q86YD5 345 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 OR14K1Q8NGZ2 314 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 OR2T27Q8NH04 317 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 ADI1Q9BV57 179 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 METTL8Q9H825 291 aaKnown RBP12.68□□□□□ -0.38
CPSF1-211ENST00000533492 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.68□□□□□ -0.38
CPSF1-211ENST00000533492 SLC22A13Q9Y226 551 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 POLDIP2Q9Y2S7 368 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 V9GYS6 101 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 TRBV23-1A0A0A0MS06 115 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 A0A1B0GTI1 187 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 CLPSL1A2RUU4 121 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 A6NIN4 97 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 RFPL4AA6NLU0 287 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 RFPL4AL1F8VTS6 287 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 H0YAE9 185 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 J3QT63 122 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 NPFFO15130 113 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 SYNGR1O43759 233 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 GPR137BO60478 399 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 HTR1FP30939 366 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 RELBQ01201 579 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 KLRD1Q13241 179 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 NCR3LG1Q68D85 454 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 FAM185AQ8N0U4 392 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 POC1AQ8NBT0 407 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 OR10H4Q8NGA5 316 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 OR8J1Q8NGP2 316 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 SDSLQ96GA7 329 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 ZNF488Q96MN9 340 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 RBM4BQ9BQ04 359 aaKnown RBP12.67□□□□□ -0.38
CPSF1-211ENST00000533492 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 ELL3Q9HB65 397 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-211ENST00000533492 ZNF222Q9UK12 451 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 OAZ3Q9UMX2 235 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 MGAM2Q2M2H8 2515 aa12.67□□□□□ -0.38
CPSF1-211ENST00000533492 A0A1W2PQL4 384 aaPredicted RBP12.66□□□□□ -0.38
CPSF1-211ENST00000533492 MEIOCA2RUB1 952 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 METTL15A6NJ78 407 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 SAC3D1A6NKF1 404 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 DHRS7CA6NNS2 312 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 SLC1A7O00341 560 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 NXPH2O95156 264 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 APOL3O95236 402 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 PRDX2P32119 198 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 UBE2E1P51965 193 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 CDC42P60953 191 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 TMEM42Q69YG0 159 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 SSX6Q7RTT6 188 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 OR5D13Q8NGL4 314 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 TNFRSF14Q92956 283 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 RFKQ969G6 155 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 OSBPL10Q9BXB5 764 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 GABARAPL3Q9BY60 117 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 SLC7A11Q9UPY5 501 aa12.66□□□□□ -0.38
CPSF1-211ENST00000533492 SF3B6Q9Y3B4 125 aaKnown RBP12.66□□□□□ -0.38
CPSF1-211ENST00000533492 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 FAM230AA0A1W2PPH8 454 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 PQLC2LA1A4F0 135 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 ANKRD61A6NGH8 418 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 SYT7O43581 403 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 NOS1APO75052 506 aaPredicted RBP12.65□□□□□ -0.38
CPSF1-211ENST00000533492 SULT1C4O75897 302 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 PGA5P0DJD9 388 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 ACSM1Q08AH1 577 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 TMED1Q13445 227 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 CATSPERDQ86XM0 798 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 PNKDQ8N490 385 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 ZNF561Q8N587 486 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 CD177Q8N6Q3 437 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 TRMT10AQ8TBZ6 339 aaKnown RBP12.65□□□□□ -0.38
CPSF1-211ENST00000533492 EME1Q96AY2 570 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 IMPAD1Q9NX62 359 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 ZNRD1Q9P1U0 126 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 RNF114Q9Y508 228 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 ORC6Q9Y5N6 252 aa12.65□□□□□ -0.38
CPSF1-211ENST00000533492 H3BSH0 61 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 SERPINA3P01011 423 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 CCL1P22362 96 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 SAA4P35542 130 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 RPL31P62899 125 aaKnown RBP12.64□□□□□ -0.39
CPSF1-211ENST00000533492 BRICD5Q6PL45 260 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 TREML4Q6UXN2 200 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 Q6ZSR3 168 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 FAM220AQ7Z4H9 259 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 ANGPTL5Q86XS5 388 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 BATF2Q8N1L9 274 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 CCDC54Q8NEL0 328 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 WFDC12Q8WWY7 111 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 PYDC1Q8WXC3 89 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 RORBQ92753 470 aa12.64□□□□□ -0.39
CPSF1-211ENST00000533492 NRIP2Q9BQI9 281 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms