RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 PDZK1IP1Q13113 114 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 SF3B4Q15427 424 aaKnown RBP eCLIP11.52□□□□□ -0.563e-7■■■■□ 21.2
CDC27-210ENST00000533415 TRAPPC6BQ86SZ2 158 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 BEST4Q8NFU0 473 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 OR10R2Q8NGX6 335 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 RND1Q92730 232 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 MARS2Q96GW9 593 aaKnown RBP11.52□□□□□ -0.56
CDC27-210ENST00000533415 SP140LQ9H930 580 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 TREM2Q9NZC2 230 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 MEMO1Q9Y316 297 aa11.52□□□□□ -0.56
CDC27-210ENST00000533415 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 F5H5P2 479 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 MSTNO14793 375 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 PRB1P04280 392 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 GTF2F2P13984 249 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 NR4A2P43354 598 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 ZNF260Q3ZCT1 412 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 SEZ6L2Q6UXD5 910 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 C1orf162Q8NEQ5 155 aaPredicted RBP11.52□□□□□ -0.57
CDC27-210ENST00000533415 PRR7Q8TB68 274 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 TINAGL1Q9GZM7 467 aaPredicted RBP11.52□□□□□ -0.57
CDC27-210ENST00000533415 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 NUDT15Q9NV35 164 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 TUBD1Q9UJT1 453 aa11.52□□□□□ -0.57
CDC27-210ENST00000533415 PQLC2LA1A4F0 135 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 MEX3AA1L020 520 aaKnown RBP11.51□□□□□ -0.57
CDC27-210ENST00000533415 ANKRD30BLA7E2S9 258 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 IGLV1-44P01699 117 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 THBDP07204 575 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 FUT6P51993 359 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 RBPJQ06330 500 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 DAZAP2Q15038 168 aaPredicted RBP11.51□□□□□ -0.57
CDC27-210ENST00000533415 PRAMEF6Q5VXH4 476 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 SIGIRRQ6IA17 410 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 Q6ZR03 302 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 ZCCHC24Q8N2G6 241 aaKnown RBP11.51□□□□□ -0.57
CDC27-210ENST00000533415 LINC01560Q8TB33 94 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 NEUROG1Q92886 237 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 SPSB1Q96BD6 273 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 MUCL1Q96DR8 90 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 RAB3CQ96E17 227 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 DMRTA2Q96SC8 542 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 MICU1Q9BPX6 476 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 FAAP24Q9BTP7 215 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 OBP2BQ9NPH6 170 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 MTCH1Q9NZJ7 389 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 ANKHD1Q8IWZ3 2542 aaKnown RBP11.51□□□□□ -0.57
CDC27-210ENST00000533415 AKAP6Q13023 2319 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 MLNRO43193 412 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 CRHP06850 196 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 PTBP1P26599 531 aaKnown RBP eCLIP11.51□□□□□ -0.579e-78■■■■■ 64.3
CDC27-210ENST00000533415 ATP1B3P54709 279 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 RPS27AP62979 156 aaKnown RBP11.51□□□□□ -0.57
CDC27-210ENST00000533415 KCNG3Q8TAE7 436 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 OR5P3Q8WZ94 311 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 OR10A4Q9H209 315 aa11.51□□□□□ -0.57
CDC27-210ENST00000533415 UBE2QL1A1L167 161 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 GSTZ1O43708 216 aaPredicted RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 TIMM8AO60220 97 aaPredicted RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 CSTBP04080 98 aaKnown RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 PSMB1P20618 241 aaKnown RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 PRKACBP22694 351 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 MPPED2Q15777 294 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 CEACAM21Q3KPI0 293 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 TIMM23BQ5SRD1 257 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 ADAM5Q6NVV9 412 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 OR5L1Q8NGL2 311 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 OR4C16Q8NGL9 310 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 CMTM3Q96MX0 182 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 WFIKKN1Q96NZ8 548 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 ADAT1Q9BUB4 502 aaKnown RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 MRI1Q9BV20 369 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 VPS13CQ709C8 3753 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 C16orf97H3BN30 126 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 CDIPTO14735 213 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 AKR7A2O43488 359 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 RBBP9O75884 186 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 CEBPDP49716 269 aaPredicted RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 CRYBG3Q68DQ2 2970 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 AQP3Q92482 292 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 CREB3L1Q96BA8 519 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 ST6GALNAC5Q9BVH7 336 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 METTL9Q9H1A3 318 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 ST3GAL6Q9Y274 331 aa11.5□□□□□ -0.57
CDC27-210ENST00000533415 RBMX2Q9Y388 322 aaKnown RBP11.5□□□□□ -0.57
CDC27-210ENST00000533415 IGKV1D-8A0A087WSZ0 117 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 DHRS7CA6NNS2 312 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 H7C417 338 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 RAB6AP20340 208 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 ADORA2A-AS1P86434 159 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 PLET1Q6UQ28 207 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 GPX8Q8TED1 209 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 CACNG6Q9BXT2 260 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 MTFP1Q9UDX5 166 aa11.49□□□□□ -0.57
CDC27-210ENST00000533415 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
CDC27-210ENST00000533415 ANKRD20A5PA0PJZ0 165 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms