RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 GGT3PA6NGU5 568 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 NKX6-3A6NJ46 265 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 ARPC3O15145 178 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 TXNDC12O95881 172 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 MT-ND2P03891 347 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 SLC6A6P31641 620 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 FXYD6P3P58550 94 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 NEDD8Q15843 81 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 LY6EQ16553 131 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 MEP1BQ16820 701 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 ATPAF1Q5TC12 328 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-223ENST00000533079 AADACL4Q5VUY2 407 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 ZNF826PQ6ZT77 177 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 AHSA2Q719I0 299 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 LYG1Q8N1E2 194 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 STX19Q8N4C7 294 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 IQCF1Q8N6M8 205 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 FAM216BQ8N7L0 139 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 SLC26A10Q8NG04 563 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 OR5D13Q8NGL4 314 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 OR2AJ1Q8NGZ0 328 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 OR4Q3Q8NH05 313 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 WIPF2Q8TF74 440 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-223ENST00000533079 LRRC29Q8WV35 223 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 TMEM80Q96HE8 168 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 RCC1LQ96I51 464 aaKnown RBP10.11□□□□□ -0.79
CAPN1-223ENST00000533079 CCL13Q99616 98 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 B9D2Q9BPU9 175 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 CCDC90BQ9GZT6 254 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 FGF20Q9NP95 211 aaPredicted RBP10.11□□□□□ -0.79
CAPN1-223ENST00000533079 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 CYB5R1Q9UHQ9 305 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 KCNG2Q9UJ96 466 aa10.11□□□□□ -0.79
CAPN1-223ENST00000533079 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.11□□□□□ -0.79
CAPN1-223ENST00000533079 A0A1B0GW55 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 IMPA2O14732 288 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L2P0CJ85 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L3P0CJ86 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L4P0CJ87 422 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L5P0CJ88 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L6P0CJ89 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L7P0CJ90 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 CD28P10747 220 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 IGLL1P15814 213 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 C21orf33P30042 268 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DDOSTP39656 456 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 NAA10P41227 235 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 TGM4P49221 684 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 CENPAP49450 140 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 ZNF92Q03936 586 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 RAB40BQ12829 278 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 IKZF1Q13422 519 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 NXNL2Q5VZ03 156 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 STUMQ69YW2 141 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4L9Q6RFH8 374 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DPY19L2P2Q6ZN68 376 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 ANKRD13BQ86YJ7 626 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 ERI1Q8IV48 349 aaKnown RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 FGFRL1Q8N441 504 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 PNKDQ8N490 385 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 OR8S1Q8NH09 359 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 FANK1Q8TC84 345 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 RAB2BQ8WUD1 216 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 H1FXQ92522 213 aaKnown RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 CITED2Q99967 270 aaPredicted RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 JAM3Q9BX67 310 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 ZNF702PQ9H963 129 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 PNRC2Q9NPJ4 139 aaKnown RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 CMC2Q9NRP2 79 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DNAJB11Q9UBS4 358 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DUX4Q9UBX2 424 aa10.1□□□□□ -0.79
CAPN1-223ENST00000533079 DIMT1Q9UNQ2 313 aaKnown RBP10.1□□□□□ -0.79
CAPN1-223ENST00000533079 A0A1W2PQ09 198 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-223ENST00000533079 XRCC2O43543 280 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 CHST1O43916 411 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 INMTO95050 263 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 ALDOBP05062 364 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 DBTP11182 482 aaKnown RBP10.09□□□□□ -0.79
CAPN1-223ENST00000533079 GSTT1P30711 240 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 HTR1FP30939 366 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 OTX1P32242 354 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-223ENST00000533079 GP2P55259 537 aaKnown RBP10.09□□□□□ -0.79
CAPN1-223ENST00000533079 CAV3P56539 151 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 COL10A1Q03692 680 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 ZNF91Q05481 1191 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 SNAI3Q3KNW1 292 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 ZBTB37Q5TC79 503 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 DRAM2Q6UX65 266 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 WDR82Q6UXN9 313 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 CLVS1Q8IUQ0 354 aaPredicted RBP10.09□□□□□ -0.79
CAPN1-223ENST00000533079 LINC00346Q8IVM7 164 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 GID4Q8IVV7 300 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 PROKR2Q8NFJ6 384 aa10.09□□□□□ -0.79
CAPN1-223ENST00000533079 OR56B2PQ8NGI1 322 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms