RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 BATF2Q8N1L9 274 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 ITFG2Q969R8 447 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 NRBF2Q96F24 287 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 SDSLQ96GA7 329 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 SSX3Q99909 188 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 APOL4Q9BPW4 351 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 FAM234AQ9H0X4 552 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 GPR173Q9NS66 373 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 C19orf12Q9NSK7 152 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 ZNF222Q9UK12 451 aa14.55□□□□□ -0.08
PCF11-206ENST00000533018 A0A1W2PPH5 198 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 LOC110117498-PIK3R3F6TDL0 507 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 M0R129 80 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 MAGEB4O15481 346 aaPredicted RBP14.54□□□□□ -0.08
PCF11-206ENST00000533018 SYNGR1O43759 233 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 DNAJC8O75937 253 aaPredicted RBP14.54□□□□□ -0.08
PCF11-206ENST00000533018 TSPAN9O75954 239 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 TTRP02766 147 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 RPL31P62899 125 aaKnown RBP14.54□□□□□ -0.08
PCF11-206ENST00000533018 CLVS2Q5SYC1 327 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 BCL2L15Q5TBC7 163 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 ZBTB37Q5TC79 503 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 ZNF322Q6U7Q0 402 aaPredicted RBP14.54□□□□□ -0.08
PCF11-206ENST00000533018 PLEKHG7Q6ZR37 379 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 ZNF573Q86YE8 665 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 SLC35F2Q8IXU6 374 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 MKXQ8IYA7 352 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 TCEANCQ8N8B7 351 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 POC1AQ8NBT0 407 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 BEND2Q8NDZ0 799 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 OR4M1Q8NGD0 313 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 FAM110DQ8TAY7 271 aaPredicted RBP14.54□□□□□ -0.08
PCF11-206ENST00000533018 C17orf50Q8WW18 174 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 KRT84Q9NSB2 600 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 OR14J1Q9UGF5 321 aa14.54□□□□□ -0.08
PCF11-206ENST00000533018 TET2Q6N021 2002 aaPredicted RBP14.54□□□□□ -0.08
PCF11-206ENST00000533018 A6NIN4 97 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 SLC22A31A6NKX4 558 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 ZNF670-ZNF695F2Z2N8 137 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 NXPH2O95156 264 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 GABRA5P31644 462 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 PRDX2P32119 198 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 CEBPDP49716 269 aaPredicted RBP14.53□□□□□ -0.08
PCF11-206ENST00000533018 FAHD1Q6P587 224 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 ZNF561Q8N587 486 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 CD177Q8N6Q3 437 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 OR5K1Q8NHB7 308 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 RORBQ92753 470 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 MOB1AQ9H8S9 216 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 OR52A1Q9UKL2 312 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 POLDIP2Q9Y2S7 368 aa14.53□□□□□ -0.08
PCF11-206ENST00000533018 hCG_1809904A0A1W2PP81 198 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 A0A1W2PPE2 198 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 A0A1W2PR64 198 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 A0A1W2PRV1 198 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 J3QT63 122 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 MITFO75030 526 aaPredicted RBP14.52□□□□□ -0.09
PCF11-206ENST00000533018 TSPAN15O95858 294 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 IGLV3-1P01715 115 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 PAX6P26367 422 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 LGALS4P56470 323 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 ODF4Q2M2E3 257 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 C2orf68Q2NKX9 166 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 TMEM200BQ69YZ2 307 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 HCP5Q6MZN7 132 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 OR2T27Q8NH04 317 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 BCAS4Q8TDM0 211 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 HEXA-AS1Q9H8Q6 139 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 R4GMQ9 66 aa14.52□□□□□ -0.09
PCF11-206ENST00000533018 G3V2T6 193 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 DLGAP1O14490 977 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 RPP14O95059 124 aaKnown RBP14.51□□□□□ -0.09
PCF11-206ENST00000533018 PGA5P0DJD9 388 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 COX7A1P24310 79 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 LRRC75BQ2VPJ9 315 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 NXNL2Q5VZ03 156 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 Q6ZTK2 550 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 ELMOD2Q8IZ81 293 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 TRMT10AQ8TBZ6 339 aaKnown RBP14.51□□□□□ -0.09
PCF11-206ENST00000533018 TMEM163Q8TC26 289 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 SLC7A6OSQ96CW6 309 aaPredicted RBP14.51□□□□□ -0.09
PCF11-206ENST00000533018 IL4I1Q96RQ9 567 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 MNTQ99583 582 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 TBX5Q99593 518 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 ADGRL4Q9HBW9 690 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 CLN6Q9NWW5 311 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 USE1Q9NZ43 259 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.51□□□□□ -0.09
PCF11-206ENST00000533018 SIGLEC9Q9Y336 463 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 SNX5Q9Y5X3 404 aa14.51□□□□□ -0.09
PCF11-206ENST00000533018 FAM230AA0A1W2PPH8 454 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 PQLC2LA1A4F0 135 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 H3BSH0 61 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 SRSF10O75494 262 aaKnown RBP14.5□□□□□ -0.09
PCF11-206ENST00000533018 CSF1P09603 554 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 PIPP12273 146 aaPredicted RBP14.5□□□□□ -0.09
PCF11-206ENST00000533018 CCL3L1P16619 93 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 ERVFRD-1P60508 538 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 AADACL4Q5VUY2 407 aa14.5□□□□□ -0.09
PCF11-206ENST00000533018 ZNF782Q6ZMW2 699 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms