RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 A0A1B0GTH9 108 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 AGFG2O95081 481 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 AKR1C3P42330 323 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF816Q0VGE8 651 aaPredicted RBP13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 BTN1A1Q13410 526 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF764Q96H86 408 aaPredicted RBP13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 GRAMD2BQ96HH9 432 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 OR4F4Q96R69 305 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 FLVCR2Q9UPI3 526 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 A0A1W2PQD3 144 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 CDX4O14627 284 aaPredicted RBP13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 RRASP10301 218 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 GNG10P50151 68 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 SNRPNP63162 240 aaKnown RBP13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 DERL3Q96Q80 235 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 AUNIPQ9H7T9 357 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 TRAPPC4Q9Y296 219 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC25A6P12236 298 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 KISS1Q15726 138 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 MOGAT1Q96PD6 335 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 SCN3AQ9NY46 2000 aa13.15□□□□□ -0.31
PCDHA9-202ENST00000532602 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 C1QBP02746 253 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 SMIM4Q8WVI0 70 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 CXXC4Q9H2H0 198 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF385DQ9H6B1 395 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 TPRP12270 2363 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 TRAV38-1A0A0B4J264 116 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF785A8K8V0 405 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 PMS2CLQ68D20 193 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 RPL7L1Q6DKI1 246 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 FBXO8Q9NRD0 319 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 RYDENQ9NUL5 291 aaKnown RBP13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 OR6C3Q9NZP0 311 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 KIF13BQ9NQT8 1826 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 OR6C68A6NDL8 312 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 GUCA2AQ02747 115 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 TMEM128Q5BJH2 165 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 LYG1Q8N1E2 194 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 ACY3Q96HD9 319 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 LOXL4Q96JB6 756 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 GSX2Q9BZM3 304 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 LRRC3CA6NJW4 275 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF90Q03938 601 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 BHLHA15Q7RTS1 189 aaPredicted RBP13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 OR2M5A3KFT3 312 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF727A8MUV8 499 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 BRS3P32247 399 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 CD226Q15762 336 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 FKBP11Q9NYL4 201 aa13.14□□□□□ -0.31
PCDHA9-202ENST00000532602 SEC14L6B5MCN3 397 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 GP1BAP07359 652 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 SMIM17P0DL12 118 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 KIR2DS2P43631 304 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 SKP2Q13309 424 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 OR5I1Q13606 314 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 ZNF787Q6DD87 383 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 FAM122CQ6P4D5 195 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 DYNC2LI1Q8TCX1 351 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 C4orf45Q96LM5 186 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 DOCK3Q8IZD9 2030 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 PLPP3O14495 311 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 PPP1R2P9O14990 202 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 ETFDHQ16134 617 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 Q56UQ5 140 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 WDR54Q9H977 334 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 CCL3P10147 92 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 MAGEB1P43366 347 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 OR2B8PP59922 312 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 STPG1Q5TH74 334 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 DEFB108AA8MXU0 73 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 ADAM20O43506 726 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 GABRB1P18505 474 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 P2RX3P56373 397 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 MAGT1Q9H0U3 335 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 NME2P1O60361 137 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 S100A4P26447 101 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 CDKN2AP42771 156 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 OR52N4Q8NGI2 321 aa13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 RBPMSQ93062 196 aaKnown RBP13.13□□□□□ -0.31
PCDHA9-202ENST00000532602 A0A1W2PN81 502 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 CHRNA7P36544 502 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 C1QL3Q5VWW1 255 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 CDH26Q8IXH8 852 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 SEBOXQ9HB31 216 aaPredicted RBP13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 PTGFRP43088 359 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 ID4P47928 161 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 TMED6Q8WW62 240 aa13.12□□□□□ -0.31
PCDHA9-202ENST00000532602 HGDQ93099 445 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms