RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 ORAI1Q96D31 301 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 RAB39BQ96DA2 213 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 NR1H4Q96RI1 486 aaPredicted RBP18.69■□□□□ 0.58
LRRK1-208ENST00000532029 VCX3AQ9NNX9 186 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 NOX4Q9NPH5 578 aa18.69■□□□□ 0.58
LRRK1-208ENST00000532029 INMTO95050 263 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 CYB5AP00167 134 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 FSTP19883 344 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 GLRA1P23415 457 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 MPZP25189 248 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 GABRA5P31644 462 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 IL24Q13007 206 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 NEDD8Q15843 81 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 ZNF404Q494X3 552 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 ASPHD2Q6ICH7 369 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 UNQ9370/PRO34162Q6UXP9 181 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 CEACAM19Q7Z692 300 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 SPACA5Q96QH8 159 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 TMEM246Q9BRR3 403 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 ZNF665Q9H7R5 613 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 TMEM138Q9NPI0 162 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 DNAJB11Q9UBS4 358 aa18.68■□□□□ 0.58
LRRK1-208ENST00000532029 CCRL2O00421 344 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 GPX5O75715 221 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 RGS9O75916 674 aaPredicted RBP18.67■□□□□ 0.58
LRRK1-208ENST00000532029 IGFBP3P17936 291 aaPredicted RBP18.67■□□□□ 0.58
LRRK1-208ENST00000532029 BDKRB2P30411 391 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 INSL4Q14641 139 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 SSX1Q16384 188 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 MICBQ29980 383 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 TMEM249Q2WGJ8 235 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 SLC25A26Q70HW3 274 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 MKXQ8IYA7 352 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 POC1AQ8NBT0 407 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 RFT1Q96AA3 541 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 GPER1Q99527 375 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 FOXJ3Q9UPW0 622 aa18.67■□□□□ 0.58
LRRK1-208ENST00000532029 SF3B6Q9Y3B4 125 aaKnown RBP18.67■□□□□ 0.58
LRRK1-208ENST00000532029 TRAV8-7A0A075B6U6 113 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 IGHV3OR15-7A0A075B7D8 119 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 CEACAM18A8MTB9 384 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 PIN1P1O15428 100 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 IGHV2-5P01817 119 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 ALDOBP05062 364 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 PGA5P0DJD9 388 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 MUC1P15941 1255 aaPredicted RBP18.66■□□□□ 0.58
LRRK1-208ENST00000532029 IL2RGP31785 369 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 LMO4P61968 165 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 KISS1Q15726 138 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 DDI2Q5TDH0 399 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 TEX36Q5VZQ5 186 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 DCDC5Q6ZRR9 648 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 SATL1Q86VE3 508 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 TMIGD2Q96BF3 282 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 ZNF488Q96MN9 340 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 WDR13Q9H1Z4 485 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 PATZ1Q9HBE1 687 aaKnown RBP18.66■□□□□ 0.58
LRRK1-208ENST00000532029 NDUFB11Q9NX14 153 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 RASL12Q9NYN1 266 aa18.66■□□□□ 0.58
LRRK1-208ENST00000532029 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.65■□□□□ 0.58
LRRK1-208ENST00000532029 NDUFA2O43678 99 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 NOS1APO75052 506 aaPredicted RBP18.65■□□□□ 0.58
LRRK1-208ENST00000532029 SC5DO75845 299 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 RPS2P15880 293 aaKnown RBP18.65■□□□□ 0.58
LRRK1-208ENST00000532029 GZMKP49863 264 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 PDZK1IP1Q13113 114 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 HSD17B12Q53GQ0 312 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 FAM90A1Q86YD7 464 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 OR52N4Q8NGI2 321 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 OR5D18Q8NGL1 313 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 PHYHIPQ92561 330 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 SLAMF9Q96A28 289 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 CEP19Q96LK0 163 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 TCF7L1Q9HCS4 588 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 MIOXQ9UGB7 285 aa18.65■□□□□ 0.58
LRRK1-208ENST00000532029 SPRY1O43609 319 aaPredicted RBP18.64■□□□□ 0.57
LRRK1-208ENST00000532029 ARL6IP5O75915 188 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 NXPH2O95156 264 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 GYPAP02724 150 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 ACAA1P09110 424 aaPredicted RBP18.64■□□□□ 0.57
LRRK1-208ENST00000532029 SMIM21Q3B7S5 101 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 SYT6Q5T7P8 510 aaPredicted RBP18.64■□□□□ 0.57
LRRK1-208ENST00000532029 TMEM91Q6ZNR0 172 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 MUL1Q969V5 352 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 C12orf43Q96C57 262 aaKnown RBP18.64■□□□□ 0.57
LRRK1-208ENST00000532029 SEH1LQ96EE3 360 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 NRIP2Q9BQI9 281 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 SLITRK2Q9H156 845 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 SNTG1Q9NSN8 517 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 NLKQ9UBE8 527 aa18.64■□□□□ 0.57
LRRK1-208ENST00000532029 MAP1AP78559 2803 aaPredicted RBP18.64■□□□□ 0.57
LRRK1-208ENST00000532029 TRAPPC2LH3BP13 241 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 GABRPO00591 440 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 MAS1P04201 325 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 UCHL1P09936 223 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 IGHV4-31P0DP07 118 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 TMEM225BP0DP42 221 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 CPT2P23786 658 aa18.63■□□□□ 0.57
LRRK1-208ENST00000532029 ZNF93P35789 620 aaPredicted RBP18.63■□□□□ 0.57
LRRK1-208ENST00000532029 FABP5Q01469 135 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms