RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 L3HYPDHQ96EM0 354 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 LINC00167Q96N53 147 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 ALS2CR12Q96Q35 445 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 SPACA5Q96QH8 159 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 CIB1Q99828 191 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 COPS4Q9BT78 406 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 OR52A5Q9H2C5 316 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 SLC38A1Q9H2H9 487 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 SPACA1Q9HBV2 294 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 EXOSC4Q9NPD3 245 aaKnown RBP1.78□□□□□ -2.12
CD44-234ENST00000531873 RHBDL2Q9NX52 303 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 CHMP5Q9NZZ3 219 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 RAB23Q9ULC3 237 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 ORC6Q9Y5N6 252 aa1.78□□□□□ -2.12
CD44-234ENST00000531873 KIF26AQ9ULI4 1882 aaPredicted RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 SMARCA2P51531 1590 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 BICRAQ9NZM4 1560 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 GPR179Q6PRD1 2367 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 F8VP50 259 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 RNASEK-C17orf49H0YIS7 233 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 UPK1AO00322 258 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 PLPP3O14495 311 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 CDIPTO14735 213 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 POLR3GO15318 223 aaPredicted RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 PLIN3O60664 434 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 MED6O75586 246 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 FADS2O95864 444 aaKnown RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 GP1BAP07359 652 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 PRSS3P35030 304 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 CMC4P56277 68 aaPredicted RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 PFN3P60673 137 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 VSNL1P62760 191 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 GRB2P62993 217 aaKnown RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 LAMTOR4Q0VGL1 99 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 C16orf72Q14CZ0 275 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 USF2Q15853 346 aaPredicted RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 LINC00303Q3SY05 128 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 FBXL19-AS1Q494R0 122 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 ABCA11PQ4W5N1 156 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 SYT6Q5T7P8 510 aaPredicted RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 HHATQ5VTY9 493 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 ZNF470Q6ECI4 717 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 THOC7Q6I9Y2 204 aaKnown RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 ERO1BQ86YB8 467 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 NELFCDQ8IXH7 590 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 SLC25A29Q8N8R3 303 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 NECAP1Q8NC96 275 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 OR4K2Q8NGD2 314 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 ANGPTL6Q8NI99 470 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 ZNF461Q8TAF7 563 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 SLC25A46Q96AG3 418 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 CCDC124Q96CT7 223 aaKnown RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 SDHCQ99643 169 aaPredicted RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 TIMM29Q9BSF4 260 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 CHCHD7Q9BUK0 85 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 TMED9Q9BVK6 235 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 SND1-IT1Q9HBX3 110 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 C12orf4Q9NQ89 552 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 MS4A12Q9NXJ0 267 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 GMEB1Q9Y692 573 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 YLPM1P49750 1951 aaKnown RBP1.77□□□□□ -2.13
CD44-234ENST00000531873 SCN4AP35499 1836 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 CACNA1AO00555 2505 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 KDM6BO15054 1643 aa1.77□□□□□ -2.13
CD44-234ENST00000531873 MAP3K19Q56UN5 1328 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 KIR2DS1A0A191URI9 304 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 NDUFS6O75380 124 aaKnown RBP1.76□□□□□ -2.13
CD44-234ENST00000531873 GATBO75879 557 aaKnown RBP1.76□□□□□ -2.13
CD44-234ENST00000531873 DHRS3O75911 302 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 MPZL1O95297 269 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 IGKV1-39P01597 117 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 IGKV1D-39P04432 117 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 SLC35E2BP0CK96 405 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 MUC1P15941 1255 aaPredicted RBP1.76□□□□□ -2.13
CD44-234ENST00000531873 MAGEA3P43357 314 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 ERFP50548 548 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 TPBGQ13641 420 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 PMVKQ15126 192 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 YIF1BQ5BJH7 314 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 FAM71E1Q6IPT2 247 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 CLEC19AQ6UXS0 136 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 AHSA2Q719I0 299 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 PRNTQ86SH4 94 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 BBS7Q8IWZ6 715 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 C17orf78Q8N4C9 275 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 SPICQ8N5J4 248 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 SPANXA2-OT1Q8N9U9 137 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 OR4M2Q8NGB6 313 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 OR2AE1Q8NHA4 323 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 SNF8Q96H20 258 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 SERPINB11Q96P15 392 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 CTRCQ99895 268 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 TBL1YQ9BQ87 522 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 TMBIM4Q9HC24 238 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 IFT46Q9NQC8 304 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 C21orf62Q9NYP8 219 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 TAS2R5Q9NYW4 299 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 ANXA10Q9UJ72 324 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 ENPP4Q9Y6X5 453 aa1.76□□□□□ -2.13
CD44-234ENST00000531873 CACNA1DQ01668 2161 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms