RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ZNF331Q9NQX6 463 aaPredicted RBP2.87□□□□□ -1.95
USP47-211ENST00000531513 C1orf109Q9NX04 203 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 WSB1Q9Y6I7 421 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
USP47-211ENST00000531513 NPHP4O75161 1426 aaPredicted RBP2.86□□□□□ -1.95
USP47-211ENST00000531513 SIGLEC1Q9BZZ2 1709 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
USP47-211ENST00000531513 CCL15-CCL14A0A0B4J2E2 113 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 KIR2DS1A0A191URI9 304 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 BPY2O14599 106 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 MYO1DO94832 1006 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 SNAP29O95721 258 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 APCSP02743 223 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 S100A6P06703 90 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZNF688P0C7X2 276 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZNF823P16415 610 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZNF3P17036 446 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 PSMB5P28074 263 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 GTF2H1P32780 548 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 AQP5P55064 265 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 LAMTOR4Q0VGL1 99 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 MADCAM1Q13477 382 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 CCL15Q16663 113 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 UBE2SQ16763 222 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 CEACAM16Q2WEN9 425 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 TMEM249Q2WGJ8 235 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 FBXL19-AS1Q494R0 122 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 OR10J3Q5JRS4 329 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 TSPO2Q5TGU0 170 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 PLEKHG7Q6ZR37 379 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZNF433Q8N7K0 673 aaPredicted RBP2.86□□□□□ -1.95
USP47-211ENST00000531513 ACBD4Q8NC06 268 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 NECAP1Q8NC96 275 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 OR4M1Q8NGD0 313 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 OR4K5Q8NGD3 323 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 OR5AK3PQ8NH89 298 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 OR2AE1Q8NHA4 323 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ENKURQ8TC29 256 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 RNASEH2CQ8TDP1 164 aaKnown RBP2.86□□□□□ -1.95
USP47-211ENST00000531513 PHF10Q8WUB8 498 aaKnown RBP2.86□□□□□ -1.95
USP47-211ENST00000531513 NELFBQ8WX92 580 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ANP32BQ92688 251 aaKnown RBP2.86□□□□□ -1.95
USP47-211ENST00000531513 CCDC127Q96BQ5 260 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 PDXPQ96GD0 296 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZIM3Q96PE6 472 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZNF382Q96SR6 550 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 HBEGFQ99075 208 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 SHCBP1LQ9BZQ2 653 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ASB8Q9H765 288 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 WFDC1Q9HC57 220 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 ZNRD1Q9P1U0 126 aa2.86□□□□□ -1.95
USP47-211ENST00000531513 IGHV6-1A0A0B4J1U7 121 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 IGHV3-72A0A0B4J1Y9 119 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 OR5H1A6NKK0 313 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 H0YJW9 148 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 CHST10O43529 356 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 EIF1BO60739 113 aaKnown RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 NIPSNAP2O75323 286 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 IGLV2-8P01709 118 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 IGHV3-11P01762 117 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 DRD3P35462 400 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 EIF1P41567 113 aaKnown RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 TAS2R31P59538 309 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 SYCNQ0VAF6 134 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 PIGHQ14442 188 aaPredicted RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 CEACAM21Q3KPI0 293 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 UGT2A3Q6UWM9 527 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 RIMKLAQ8IXN7 391 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 ZNF786Q8N393 782 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 ZNF645Q8N7E2 425 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 ZMYND19Q96E35 227 aaPredicted RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 RSG1Q9BU20 258 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 SLC17A9Q9BYT1 436 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 WDR54Q9H977 334 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 ASCL3Q9NQ33 180 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 DIABLOQ9NR28 239 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 C8orf17Q9NRJ1 99 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 NKIRAS1Q9NYS0 192 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 DNAJC27Q9NZQ0 273 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 ZNF222Q9UK12 451 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 CELA1Q9UNI1 258 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 FARSAQ9Y285 508 aaKnown RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 V9GYY5 206 aaPredicted RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 RAD50Q92878 1312 aa2.85□□□□□ -1.95
USP47-211ENST00000531513 TET2Q6N021 2002 aaPredicted RBP2.85□□□□□ -1.95
USP47-211ENST00000531513 NUP153P49790 1475 aaKnown RBP2.84□□□□□ -1.95
USP47-211ENST00000531513 WI2-2373I1.2A0A1W2PRP0 233 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 C5orf63A6NC05 138 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 FABP12A6NFH5 140 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 UBDO15205 165 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 TOX3O15405 576 aaPredicted RBP2.84□□□□□ -1.95
USP47-211ENST00000531513 FABP7O15540 132 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 SPAG7O75391 227 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 HLA-DQA1P01909 254 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 OR56A5P0C7T3 313 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 PSG2P11465 335 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 TAC1P20366 129 aa2.84□□□□□ -1.95
USP47-211ENST00000531513 ZNHIT3Q15649 155 aaPredicted RBP2.84□□□□□ -1.95
USP47-211ENST00000531513 DEFB116Q30KQ4 102 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms